Leifsonia sp. PS1209: HF024_08400
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Entry
HF024_08400 CDS
T06547
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF024_08400 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_08400 (mutM)
Enzymes [BR:
leif01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HF024_08400 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HF024_08400 (mutM)
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF024_08400 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DZR
Zn_ribbon_6
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QIZ98527
UniProt:
A0A6H1W8P0
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All DBs
Position
1777863..1778783
Genome browser
AA seq
306 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVTGATILGVEVFEPRSLKRHDPVAGAFDALLTGRVMETPARRG
KFLWIPLAAASASESRSAIVAHLGMSGQILLREPGAVENGLLRIRMHIEQPGYGELWVHF
VDQRIFGSMAVDALVPTADGAPGGLGTDEPLVPSQVAHIARDPLDPAFSDAAFAAALSRK
NTGIKRALLDQTLISGIGNIYADEALWAAKLHYAQPASSLSRARIRGLLAEVRLVLQKAL
AEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGKPCPRCGTPIVREQFMNRSSHFCPRCQR
LRPARP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagcttcccgaggttgaggtcgtccgggcgggcctggcgcccgccgtcaccgga
gcgaccatcctcggcgtcgaagtcttcgagccgcggtctctgaaacgccacgacccggtc
gccggtgcgttcgacgcgctgctcaccggccgggtgatggagaccccggcgcggcgcggc
aagttcttgtggatcccgctcgctgcggcctcggcttctgagtctcgctcggcgatcgtc
gcgcacctgggcatgagcgggcagatcctcctgcgggagcctggcgccgtcgagaacggg
ctgctgcgcatccggatgcacatcgagcagcccgggtacggcgagctgtgggtgcacttc
gtcgatcagcgcatcttcggctcgatggcggtggatgcgctcgtccccaccgcagacggc
gcgccaggcggcctgggcacggacgagccgctcgtgccgtcgcaggtcgcccacatcgcc
cgcgacccgctcgaccccgccttctcggatgcggcgttcgccgccgccctgtcccggaag
aataccggcatcaagcgcgcgctgctcgaccagaccctgatcagcggcatcggcaacatc
tacgcggacgaggccctctgggcggcgaagctgcactacgcgcagccggcgtcgtcgctc
tcgcgggcgcgcatccggggcctgttggcggaggtgcgcctggtgctgcagaaggcgctg
gcggagggcggcaccagcttcgacgcccagtacgtcaacgtcaacggcgcctccggctac
ttctcgcacagcctcaacgcgtacggccagcagggcaagccgtgcccgcgctgcggcacg
ccgatcgtgcgcgagcagttcatgaaccgctcctcccacttctgcccccgctgccagcgc
ctgcgccccgcgcgcccctga
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