Leifsonia sp. PS1209: HF024_10035
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Entry
HF024_10035 CDS
T06547
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
leif
Leifsonia sp. PS1209
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leif03019
]
HF024_10035
Enzymes [BR:
leif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HF024_10035
Messenger RNA biogenesis [BR:
leif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HF024_10035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
MTR4_beta-barrel
nSTAND_NTPase5
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIZ98809
LinkDB
All DBs
Position
complement(2104001..2106430)
Genome browser
AA seq
809 aa
AA seq
DB search
MTDQLSPAERYAASRTRTRQPLVEAFRAGLRFDLDPFQREACASLEEGKSVLVAAPTGAG
KTIVAEFAVFLAMREPNAKVFYTAPMKALSNQKFQELVDEYGPESVGLLTGDTNVNSRAR
IVVMTTEVLRNMLYADSDLLTDLAYVVMDEVHYLADRFRGAVWEEVIIHLPQSVRMVSLS
ATVSNAEEFGDWLQAVRGDTDVIVSEERPVPLEQHILMRSKLIDLFDSSGLAATNRVNPE
LVQMARYGGRVLSSRQMRDVGRYHSRGGRPDTYRMDRADLVKLLGEHNLLPAIFFIFSRN
GCDQAVRQTLRSGVKLTQQHERDEIRAIVEERCRTLLDEDLAVLGYWEWLEGLERGVAAH
HAGLLPAFKEVVEELFRRKLVKVVFATETLALGINMPARTVVLEKLEKFNGEARVPITPG
EYTQLTGRAGRRGIDVEGHSVIQWQDGLDPQAVASLASRRSYPLNSSFRPTYNMAVNLID
QFGRERTREILESSFAQFQADRAVVDLARKVRQQEESLAGYEKAMTCHLGDFREYSGIRR
ELSDLERKGSSMEHASRADRDKRQRRLTALRKRMKEHPCHRCPDRENHARWAERWWKLKR
ETDALSSQIRSRTGAVAKVFDRVSDVLLELGYLNREDDVTTLTVHGRTLKRIYGERDLLV
AECLRRNIWNQLDAPSLAAMACALVFEPRRDEGLAHERTLPRGAFRPALDKTIDIWSRLD
DLERENRLPGSEPPSTSLAMAMHAWAKGTSLNTVLSEADMAAGDFVRWTKQTIDLLDQLS
LVAQGPVGRTARQALESIRRGIVAYSSVA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcagctgtctccagccgaacgctacgcggcgtcgcgcacgcgcacccgccag
cctctcgtcgaggccttccgtgcggggctccgcttcgacctcgacccgttccagcgcgag
gcctgcgcgagcctcgaagagggcaagagcgtgctggtggccgctccgacgggagccggc
aagacgatcgtcgccgagttcgccgtgttcctcgcgatgcgcgagccgaacgcgaaggtc
ttctacacggcgccgatgaaggcgctgagcaaccagaagttccaggagctggtggacgag
tacgggccggagtccgtcggcctcctgaccggcgacaccaacgtcaactcccgcgcgcgc
atcgtcgtgatgacgaccgaagtgctgcgcaacatgctctacgccgactccgacctgctg
accgacctcgcatacgtggtgatggacgaggtgcactacctcgcagaccggttccgcggc
gcggtgtgggaggaggtcatcatccaccttccgcagtcggtccggatggtctcgctgagc
gcgacggtgtccaacgccgaggagttcggcgactggctgcaggcggtgcgcggcgacacg
gacgtgatcgtgtcggaggagcgtcccgtcccgctggagcagcacatcctgatgcggtcg
aagctgatcgacctgttcgactcgtccggcctcgcggcgaccaaccgggtgaacccggag
ctcgtgcagatggcgcgctacggcggccgggtgctgagcagcaggcagatgcgggacgtc
gggcgctaccactccaggggcggccgtccggacacgtaccggatggacagggccgacctc
gtcaagctgctcggcgagcacaacctgctccccgccatcttcttcatcttcagccgcaac
ggctgcgaccaggccgtgcgccagacgctccgctccggcgtgaagctgacccagcaacac
gagcgcgacgagatccgcgcgatcgtcgaggaacgctgcaggaccctgctcgacgaagac
ctcgccgtgctcgggtactgggagtggctcgaaggactcgagcgcggtgtcgccgcccac
cacgcaggtctgctgcccgccttcaaagaggtcgtggaggagctgttccgccgcaagctg
gtcaaggtcgtcttcgcgacggagacgctcgcgctcggcatcaacatgccggcgcgcacc
gtggtgctcgagaagctggagaagttcaacggggaggcgcgcgtcccgatcacgccgggg
gagtacacccagctcaccgggcgcgccggccgccggggcatcgacgtggagggccactcg
gtcatccagtggcaggacggcctcgatccgcaggctgtcgcctcgctcgcgtcccgccgc
agctacccgctgaattcgagcttccgccccacgtacaacatggcggtcaacctgatcgac
cagttcgggcgcgagcgcaccagggagatcctggagtcgtcgttcgcccagttccaggcc
gaccgtgcggtggtcgatctggcgcgcaaggtgcgccagcaggaggagtcgctcgccggg
tacgagaaggcgatgacctgccacctgggcgacttccgcgagtattcgggcatccggcgc
gagctgagcgacctggagcgcaagggctcctcgatggagcacgcctcccgggccgaccgc
gacaagcgccagcgtcggctgaccgcgctgcgcaagcggatgaaggagcacccgtgccac
cgctgcccggacagggagaaccacgccaggtgggcggagcgctggtggaagctgaagcgc
gagacggacgccctgagctcgcagatccggtcgcgcaccggagccgtcgccaaggtcttc
gaccgcgtctccgacgtgctgctcgaactcggctacctgaaccgggaggacgacgtcacg
acgctcaccgtgcacggccgcacgctcaagcgcatctacggcgaacgcgacctgctcgtg
gccgagtgcctgcgcaggaacatctggaaccagctggatgcgccgagcctcgcagcgatg
gcctgcgccctggtcttcgagccgcgccgcgacgaaggtctcgcgcacgagcgcaccctc
ccgcgcggagcattccggcctgccctcgacaagaccatcgacatctggagcagactcgac
gacctcgaacgcgagaacaggctgccgggcagcgaaccgccgtcgaccagcctggcgatg
gcgatgcacgcgtgggcgaagggcaccagcctgaacacggtgctctccgaggcggacatg
gccgccggcgacttcgtgcgctggacgaagcagaccatcgacctgctcgaccagctctca
ctcgtcgcgcagggcccggtgggacgcacggcacggcaggcactcgaatcgatcaggcgc
ggcatcgttgcttactcatccgtcgcctag
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