Leifsonia sp. PS1209: HF024_10480
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Entry
HF024_10480 CDS
T06547
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03030
DNA replication
leif03410
Base excision repair
leif03420
Nucleotide excision repair
leif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF024_10480 (polA)
03410 Base excision repair
HF024_10480 (polA)
03420 Nucleotide excision repair
HF024_10480 (polA)
03440 Homologous recombination
HF024_10480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leif03032
]
HF024_10480 (polA)
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_10480 (polA)
Enzymes [BR:
leif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF024_10480 (polA)
DNA replication proteins [BR:
leif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HF024_10480 (polA)
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HF024_10480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF024_10480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QIZ98888
UniProt:
A0A6H1W8G7
LinkDB
All DBs
Position
complement(2197479..2200151)
Genome browser
AA seq
890 aa
AA seq
DB search
MSDSEKPTLLIIDGHSLAFRAFYALPVDSFVNREGQHTNAIHGFIAMLINLLSQQRPTHI
AVAFDISRYSFRTREYPEYKGTRGETPSEFVGQIPLLEEALHAMNITTIAKEDYEADDIL
ATLSAQGAEQGYRVLIVSGDRDTIQLVNDDVTLLYPNVRGVSELKVYDPAAVRERYGIEP
HQYPEIAALVGETSDNLIGIDKVGEKTAVKWVQQYGTVENLLAHADEIKGVVGQNLRDQQ
ENALRNRRLNKLLTDVDLPVGPADLERRPLNENAVRDIFAKLQFKTLLDRLLKTAAEEGQ
LDGASGASAAIETGAIAIPPVRTMVDEELANWLAKASADGNAVGVQVELGPAGVTGFGLA
ADDDTVYVPWAAGRKDYDALEEWFASSAPKYFFRAKPQFKAMSRAGLIVDGLAFDTSIAS
WLVRPGAAAQSLAEQVYEVLGETLPVSDPNQLVALTDAVSPATEAWYMRRVAEAQMIALD
DGTRAVLDDIELPLVAVLAEMELTGVSIDSEVLARLRGELTDKANDYAARAYAEIGREVN
LGSPKQLQQVLFDDLQMPKTRSTKTGYSTDAASLADLQEKNPHPFLGLLLQHRDATKLKQ
IVETLERAVEPDGRIHTTYDQTGTSTGRISSNDPNLQNIPVRTEEGREIRSAIRSGEGFE
TLLTADYSQIEMRIMAHLSEDPGLIEAFNAGEDLHRFVGARIFGVAPEEVTSTMRSKVKA
MSYGLAYGLSAFGLSKQLRIETSEARQLMTDYFERFGNVRDYLRNVVEQARVDGYTETIF
GRRRPFADLTSTNRVLRENAERAALNAPIQGSAADVMKIAMLGIAGDLIDQKLESRMLLQ
VHDELIFEVASGEWDALEGIVRNRMAHAADLRVPLDVQVGRGPNWDAAAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagactccgaaaagcctaccctcctgatcatcgacggccattcgctggcattccgc
gccttctatgcgctcccggtggacagcttcgtcaaccgcgaaggccagcacacgaacgcc
atccacggcttcatcgcgatgctcatcaacctgctctcccagcagcgtccgacccacatc
gccgtggcgttcgacatctcgcgatactccttccgcacgagggagtacccggagtacaag
ggcacccgcggcgagacgccgtccgagttcgtcgggcagatcccgctgctggaagaggcg
ctgcacgcgatgaacatcacgaccatcgccaaggaggactacgaggccgacgacatcctg
gccacgctctccgcgcagggggccgagcagggataccgggtgctcatcgtgtccggcgac
cgcgacaccatccagctggtcaacgacgacgtcacactgctctacccgaatgtccgcggc
gtctcggagctgaaggtctacgaccccgccgccgtgcgcgagcgctacggcatcgagccg
caccagtatccggagatcgccgctctcgtcggcgagaccagcgacaacctcatcggcatc
gacaaggtgggggagaagacggcggtcaagtgggtgcagcagtacggcaccgtcgagaac
ctcctcgcccacgccgacgagatcaagggcgtcgtcgggcagaacctgcgcgaccagcag
gagaacgcgctccgcaaccgccgcctcaacaagctgctgaccgacgtcgacctgcccgtc
ggccccgccgacctcgagcgccgcccgctcaacgagaacgccgtgcgcgacatcttcgcc
aagctgcagttcaagaccctgctcgaccggctgctcaagaccgcggcggaggagggccag
ctggacggcgcatccggagcgagcgcggcgatcgagaccggcgccatcgccatcccgccg
gtgcgcacgatggtcgacgaggagctcgcgaactggctggccaaggcgtcggcggacggc
aacgccgtgggcgtgcaggtcgagctcggcccggccggcgtcaccggattcggtctcgcc
gccgacgacgacacggtgtacgtgccgtgggcggccggccgcaaggactacgacgccctc
gaggagtggttcgcgagcagcgcgcccaagtatttcttccgcgccaagccgcagttcaag
gcgatgagccgcgccgggctgatcgtggacgggctcgccttcgacacgagcatcgcatcc
tggctggtgcgtccgggcgctgccgcccagtcgctcgccgagcaggtgtacgaggtgctc
ggcgagacgctgccggtgtccgaccccaaccagctggtcgcgctcacggatgcggtgagc
ccggcgaccgaggcctggtacatgcggagggtcgccgaggcgcagatgatcgcgctcgac
gacggcacgcgtgccgtgctcgacgacatcgagctgccgctcgtcgccgtgctcgccgag
atggagctcaccggtgtcagcatcgacagcgaggtgctcgcgcgtctccgcggcgagctg
acagacaaagccaacgactacgccgcccgcgcatacgcggagatcgggcgcgaggtcaac
ctgggttcgcccaagcagctgcagcaggtgctcttcgacgacctgcagatgccgaagacg
cgctccaccaagaccggatactccaccgacgccgcgtctctggccgacctgcaggagaag
aacccgcaccccttcctcggtctgctgctgcagcaccgggatgcgacgaagctcaagcag
atcgtcgagacgctcgagcgcgccgtcgagccggatgggcgcatccacaccacctacgac
cagaccggcacgagcaccggccgcatctcgtccaacgaccccaacctgcagaacatcccg
gtccgcaccgaggagggcagggagatccgctccgccatccgcagcggcgaggggttcgag
acgctgctgaccgccgactactcgcagatcgagatgcgcatcatggcgcacctctccgaa
gatcccggcctcatcgaagcgttcaacgccggggaagacctgcaccggttcgtcggcgcc
cgcatcttcggcgtcgcgccggaggaagtcacctccacgatgcggtcgaaggtcaaggcg
atgtcgtacggcctcgcatacgggctgagcgcgttcgggctgtcgaagcagctgcgcatc
gagacgtccgaggcgcgccagctgatgacggactacttcgagcggttcggcaacgtgcgc
gactacctgcgcaacgtcgtcgagcaggcccgcgtcgacgggtacaccgagacgatcttc
ggacgccgccgcccgttcgccgacctcacgagcaccaacagggtgctgcgcgagaacgcg
gagcgcgctgcgctgaacgcgcccatccagggctcggctgccgacgtcatgaagatcgcg
atgctcggcatcgcgggggacctgatcgaccagaagctcgaatcccggatgctgctgcag
gtgcacgacgaactgatcttcgaggtcgcgagcggcgagtgggacgcgctggagggcatc
gtccgcaaccggatggcgcacgccgccgacctccgcgtgccgctcgacgtgcaggtcggc
cgcggtcccaactgggacgcggcggcccactga
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