KEGG   Leifsonia sp. PS1209: HF024_10480
Entry
HF024_10480       CDS       T06547                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
leif  Leifsonia sp. PS1209
Pathway
leif03030  DNA replication
leif03410  Base excision repair
leif03420  Nucleotide excision repair
leif03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:leif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HF024_10480 (polA)
   03410 Base excision repair
    HF024_10480 (polA)
   03420 Nucleotide excision repair
    HF024_10480 (polA)
   03440 Homologous recombination
    HF024_10480 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:leif03032]
    HF024_10480 (polA)
   03400 DNA repair and recombination proteins [BR:leif03400]
    HF024_10480 (polA)
Enzymes [BR:leif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HF024_10480 (polA)
DNA replication proteins [BR:leif03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HF024_10480 (polA)
DNA repair and recombination proteins [BR:leif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HF024_10480 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HF024_10480 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: QIZ98888
UniProt: A0A6H1W8G7
LinkDB
Position
complement(2197479..2200151)
AA seq 890 aa
MSDSEKPTLLIIDGHSLAFRAFYALPVDSFVNREGQHTNAIHGFIAMLINLLSQQRPTHI
AVAFDISRYSFRTREYPEYKGTRGETPSEFVGQIPLLEEALHAMNITTIAKEDYEADDIL
ATLSAQGAEQGYRVLIVSGDRDTIQLVNDDVTLLYPNVRGVSELKVYDPAAVRERYGIEP
HQYPEIAALVGETSDNLIGIDKVGEKTAVKWVQQYGTVENLLAHADEIKGVVGQNLRDQQ
ENALRNRRLNKLLTDVDLPVGPADLERRPLNENAVRDIFAKLQFKTLLDRLLKTAAEEGQ
LDGASGASAAIETGAIAIPPVRTMVDEELANWLAKASADGNAVGVQVELGPAGVTGFGLA
ADDDTVYVPWAAGRKDYDALEEWFASSAPKYFFRAKPQFKAMSRAGLIVDGLAFDTSIAS
WLVRPGAAAQSLAEQVYEVLGETLPVSDPNQLVALTDAVSPATEAWYMRRVAEAQMIALD
DGTRAVLDDIELPLVAVLAEMELTGVSIDSEVLARLRGELTDKANDYAARAYAEIGREVN
LGSPKQLQQVLFDDLQMPKTRSTKTGYSTDAASLADLQEKNPHPFLGLLLQHRDATKLKQ
IVETLERAVEPDGRIHTTYDQTGTSTGRISSNDPNLQNIPVRTEEGREIRSAIRSGEGFE
TLLTADYSQIEMRIMAHLSEDPGLIEAFNAGEDLHRFVGARIFGVAPEEVTSTMRSKVKA
MSYGLAYGLSAFGLSKQLRIETSEARQLMTDYFERFGNVRDYLRNVVEQARVDGYTETIF
GRRRPFADLTSTNRVLRENAERAALNAPIQGSAADVMKIAMLGIAGDLIDQKLESRMLLQ
VHDELIFEVASGEWDALEGIVRNRMAHAADLRVPLDVQVGRGPNWDAAAH
NT seq 2673 nt   +upstreamnt  +downstreamnt
gtgtcagactccgaaaagcctaccctcctgatcatcgacggccattcgctggcattccgc
gccttctatgcgctcccggtggacagcttcgtcaaccgcgaaggccagcacacgaacgcc
atccacggcttcatcgcgatgctcatcaacctgctctcccagcagcgtccgacccacatc
gccgtggcgttcgacatctcgcgatactccttccgcacgagggagtacccggagtacaag
ggcacccgcggcgagacgccgtccgagttcgtcgggcagatcccgctgctggaagaggcg
ctgcacgcgatgaacatcacgaccatcgccaaggaggactacgaggccgacgacatcctg
gccacgctctccgcgcagggggccgagcagggataccgggtgctcatcgtgtccggcgac
cgcgacaccatccagctggtcaacgacgacgtcacactgctctacccgaatgtccgcggc
gtctcggagctgaaggtctacgaccccgccgccgtgcgcgagcgctacggcatcgagccg
caccagtatccggagatcgccgctctcgtcggcgagaccagcgacaacctcatcggcatc
gacaaggtgggggagaagacggcggtcaagtgggtgcagcagtacggcaccgtcgagaac
ctcctcgcccacgccgacgagatcaagggcgtcgtcgggcagaacctgcgcgaccagcag
gagaacgcgctccgcaaccgccgcctcaacaagctgctgaccgacgtcgacctgcccgtc
ggccccgccgacctcgagcgccgcccgctcaacgagaacgccgtgcgcgacatcttcgcc
aagctgcagttcaagaccctgctcgaccggctgctcaagaccgcggcggaggagggccag
ctggacggcgcatccggagcgagcgcggcgatcgagaccggcgccatcgccatcccgccg
gtgcgcacgatggtcgacgaggagctcgcgaactggctggccaaggcgtcggcggacggc
aacgccgtgggcgtgcaggtcgagctcggcccggccggcgtcaccggattcggtctcgcc
gccgacgacgacacggtgtacgtgccgtgggcggccggccgcaaggactacgacgccctc
gaggagtggttcgcgagcagcgcgcccaagtatttcttccgcgccaagccgcagttcaag
gcgatgagccgcgccgggctgatcgtggacgggctcgccttcgacacgagcatcgcatcc
tggctggtgcgtccgggcgctgccgcccagtcgctcgccgagcaggtgtacgaggtgctc
ggcgagacgctgccggtgtccgaccccaaccagctggtcgcgctcacggatgcggtgagc
ccggcgaccgaggcctggtacatgcggagggtcgccgaggcgcagatgatcgcgctcgac
gacggcacgcgtgccgtgctcgacgacatcgagctgccgctcgtcgccgtgctcgccgag
atggagctcaccggtgtcagcatcgacagcgaggtgctcgcgcgtctccgcggcgagctg
acagacaaagccaacgactacgccgcccgcgcatacgcggagatcgggcgcgaggtcaac
ctgggttcgcccaagcagctgcagcaggtgctcttcgacgacctgcagatgccgaagacg
cgctccaccaagaccggatactccaccgacgccgcgtctctggccgacctgcaggagaag
aacccgcaccccttcctcggtctgctgctgcagcaccgggatgcgacgaagctcaagcag
atcgtcgagacgctcgagcgcgccgtcgagccggatgggcgcatccacaccacctacgac
cagaccggcacgagcaccggccgcatctcgtccaacgaccccaacctgcagaacatcccg
gtccgcaccgaggagggcagggagatccgctccgccatccgcagcggcgaggggttcgag
acgctgctgaccgccgactactcgcagatcgagatgcgcatcatggcgcacctctccgaa
gatcccggcctcatcgaagcgttcaacgccggggaagacctgcaccggttcgtcggcgcc
cgcatcttcggcgtcgcgccggaggaagtcacctccacgatgcggtcgaaggtcaaggcg
atgtcgtacggcctcgcatacgggctgagcgcgttcgggctgtcgaagcagctgcgcatc
gagacgtccgaggcgcgccagctgatgacggactacttcgagcggttcggcaacgtgcgc
gactacctgcgcaacgtcgtcgagcaggcccgcgtcgacgggtacaccgagacgatcttc
ggacgccgccgcccgttcgccgacctcacgagcaccaacagggtgctgcgcgagaacgcg
gagcgcgctgcgctgaacgcgcccatccagggctcggctgccgacgtcatgaagatcgcg
atgctcggcatcgcgggggacctgatcgaccagaagctcgaatcccggatgctgctgcag
gtgcacgacgaactgatcttcgaggtcgcgagcggcgagtgggacgcgctggagggcatc
gtccgcaaccggatggcgcacgccgccgacctccgcgtgccgctcgacgtgcaggtcggc
cgcggtcccaactgggacgcggcggcccactga

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