Leifsonia sp. PS1209: HF024_11815
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Entry
HF024_11815 CDS
T06547
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
leif
Leifsonia sp. PS1209
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leif03032
]
HF024_11815
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_11815
Enzymes [BR:
leif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HF024_11815
DNA replication proteins [BR:
leif03032
]
Prokaryotic type
DNA Topoisomerases
HF024_11815
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HF024_11815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
QIZ99129
UniProt:
A0A6H1W6D7
LinkDB
All DBs
Position
complement(2476230..2477195)
Genome browser
AA seq
321 aa
AA seq
DB search
MTRLRRSDPSGPGYRRISTKKAPTYQDEAGNTIVDERELERIRSLVVPPAWQDVWISPDA
RGHIQAVGYDQAGRKQYLYHESWRLHQDRVKFERAAQLAETLPAARRRVTMDLRQEGFGR
DRILAAALRIIDLGSLRIGSEEYLHANGSRGLTTLLCRHVAIDGDDVTLTFPAKSAQKWT
STITDPDVAALLSEIVAARGQRSRLLSWKDGTWHTIRPASLNEYIRRQTRGEFTAKDFRT
LHGTITAAATLAGLGTGGTERERTKRITAAVAAAADALGNTPAIARNSYIDPRIFDRYRQ
GEVIDLSNGRAPEPALLELLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcctccgccgcagcgacccgtccgggcccggctaccgcaggatcagcacgaag
aaggcgccgacgtaccaggacgaggccggcaacacgatcgtggacgagcgcgagctggag
cgcatccggtcgctggtggtcccgcccgcctggcaggacgtgtggatctcgccggacgcg
cgggggcacatccaggccgtcggctacgaccaggccgggcggaagcagtacctctaccac
gagtcctggcgcctgcatcaggacagggtcaagttcgagcgggcggcccagctggccgag
acgctgcccgccgcgcgccgccgcgtcacgatggacctgcggcaggagggcttcggcagg
gaccggatcctggcggcggcgctcaggatcatcgacctcggctcgctcaggatcggcagc
gaggagtatctgcacgccaacggcagcaggggactcaccacgctgctctgccgccacgtc
gccatcgacggggacgacgtgacgctgacgttcccggccaagagcgcgcagaagtggacg
agcacgatcaccgatccggatgtggcggctctgctctccgagatcgtcgcggcgcgcggc
cagcgctcgcggctgctgtcctggaaggacggcacctggcacacgatccgtcccgcgtcg
ctcaacgagtacatccggcggcagacgcgcggcgagttcaccgcgaaggacttccgcacc
ctgcacggcacgatcacggcggcggcgacgctcgccggtctcggaacgggcggcacggag
cgggagcggacgaagcgcatcaccgcggcggtcgctgcggcagcggacgcgctcggcaac
accccggcgatcgcgcgcaacagctacatcgacccgcgcatcttcgaccgctaccggcag
ggtgaggtgatcgacctgtccaacggccgcgcaccggagcccgcactgctggaactgctc
gcctag
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integrated database retrieval system
