Leifsonia sp. PS1209: HF024_12445
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Entry
HF024_12445 CDS
T06547
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03030
DNA replication
leif03430
Mismatch repair
leif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF024_12445
03430 Mismatch repair
HF024_12445
03440 Homologous recombination
HF024_12445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leif03032
]
HF024_12445
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_12445
Enzymes [BR:
leif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF024_12445
DNA replication proteins [BR:
leif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF024_12445
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF024_12445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF5375
Motif
Other DBs
NCBI-ProteinID:
QIZ99240
LinkDB
All DBs
Position
2614450..2615031
Genome browser
AA seq
193 aa
AA seq
DB search
MPLDFTAIDFETANGSAASACSVGLIKVRDGKVVDRVGWLIQPPMGHDFFQEWNTRIHGI
RAEDVVGAAGWIDQLPDLIAFAEDDYLVAHNAGFDMGVIRAACTATAVACPDYSYLCSLQ
VARRTYTLDSYRLPVAAMAAGFEDFHHHDALADAEACAAIIVHAARRHGAATIDELAAST
GSRLGRIGTPQAA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgccactggacttcaccgctatcgacttcgagaccgcgaacgggagtgcggcgtccgcc
tgctccgtcgggctgatcaaggtgcgggacggcaaggtggtcgaccgggtggggtggctc
atccagccgccgatgggacacgacttcttccaggagtggaacacgcgcatccacggcatc
cgtgcggaggacgtcgtcggcgccgccgggtggatagaccagcttcccgacctgatcgcc
ttcgcggaggacgactacctcgtcgcccacaacgccggtttcgacatgggcgtgatccgc
gcggcctgcaccgccaccgccgtcgcctgccccgactacagctacctctgcagcctgcag
gtggcccgcaggacgtacacgctcgactcctaccgcctcccggtcgccgcgatggccgcc
ggattcgaggacttccaccaccacgacgccctcgccgacgccgaagcgtgcgccgcgatc
atcgtgcacgccgcccgccgtcacggagcggccaccatcgacgagctcgccgcgagcacg
ggctcccgcctcggcaggatcggcaccccgcaggccgcctga
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