Leifsonia sp. PS1209: HF024_13470
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Entry
HF024_13470 CDS
T06547
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HF024_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_13470
Enzymes [BR:
leif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HF024_13470
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HF024_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
TrwC
AAA_19
Viral_helicase1
AAA_16
PIF1
AAA_22
DEAD
TraI_hel_assoc_N
AAA_11
nSTAND3
T2SSE
AAA
NTPase_1
PhoH
Helicase_RecD
ResIII
NACHT
ATPase_2
AAA_5
AAA_24
ORC-CDC6-like
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QIZ99419
UniProt:
A0A6H1W786
LinkDB
All DBs
Position
2834521..2836965
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AA seq
814 aa
AA seq
DB search
MADLILDATINAPKSFSIAAMLDSGLAAAYEDLQDRLRDRIVKLWQSELNARRGRGGSIR
EDLARIEVVELRHERSRSLDPHKHRHPWLNVKVQGVDGKWSNIDTRVALRFQNVINAEGD
LASRTDPAWISALAAKGFTLDEDGEIAQLQHLVRPLSKRSAQIEANKVTRTVWWKQQHPG
QEPSHDVLNQIDHWAWAVGRPSKPGELNEDGWAALIREELCTADPTIGITRSPVPVPSVA
VQDLDLELLAAKAVVDADARSTGSGGRFSVMDVRAGALRAISATGVVADRDVLVRLAEDV
VARSHTVTLISEPNAPKHVKHLMAVSTAMLKATLAQNVDAISAPGQILDMDEVAAIGQAL
EPNHSLDDGQLAGAAAIGGTSRNVVISGPAGTGKTTMLKVAGAALRGRGHKMIIVAPTKK
ASAIAGRETMSSSASLHQLLHEFGWRWATAESGATVWRRLSIGDVDSTPGGVYRGPRTRI
NPGDRIVVDEAGMLDLEAATALLDVAHDNGAGVALVGDQRQALPVGHSGAMALFWHRSSR
RVELTTTHRFNDQLWADLMLRLRHPDGDDERREVAEDLVRTDHVVMTDNDVAAREAMVEG
WFDATRLHETIALVTATHAEAQEINEAIQRRRIEYGAIRPGQAFSGQSGQPIFVGDVVQT
RRNDSAADVQNRQNWIVKAIGDDHVILTASTNTTDLRKVSLAYAREHIHLAYATTVYGVQ
GETTDRSLVGPGVDAAGLYVGLTRGKTDNAAVLVAPTETSAKYQLVEMMQRQTLEETMDK
SRDAAQTELRRAAHSPTGPIIPAGGAQRTSVGLK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacctgattctcgatgcgacgatcaacgcgccgaagtcgttctcgatcgccgcc
atgctcgactccgggttggccgccgcgtatgaagacctccaagaccgactccgtgaccgg
attgtgaagctgtggcagtccgagctcaacgcccgccgcggtagaggcggatccatccgc
gaagacctcgcccggattgaggtcgtcgaacttcgacacgaacgctcccggtcgttggac
ccccacaagcaccgccacccctggctgaacgtcaaagtccaaggcgtggacggcaaatgg
tccaacatcgacacccgtgtcgcgttgcggttccagaacgtgatcaacgccgaaggcgat
ctcgcctcccgcaccgaccccgcctggatcagtgctctcgccgcgaaaggcttcaccctc
gatgaggacggggagatcgcccaactacagcacctggtccggccgctatcgaagcggtcc
gcgcaaatcgaagccaacaaagtcacgcgtaccgtctggtggaaacagcagcatccgggc
caggaaccttcccacgacgtactcaaccaaatcgaccactgggcgtgggcagtcggcaga
cccagtaagcccggcgagctgaacgaagatggatgggccgcgctcatccgtgaagagctc
tgtaccgccgacccgacgatcggcatcacacgttcacctgtcccggtgcctagcgtcgcc
gtccaggatctcgacctcgagttgttggcagccaaagccgttgtagatgcggatgcccgg
tcgaccggcagcggcggccggttcagcgtgatggacgtgcgggccggtgcgctccgagcg
atctcggcaacgggcgttgtcgctgaccgtgacgtgctcgtgaggctcgctgaggacgtt
gtggcgcgctcgcacacggtgacactgatctccgaacctaacgccccaaagcacgtcaag
cacctcatggcagtgtccacagccatgctcaaggccaccctcgcccaaaatgtcgacgcg
atctccgcaccgggtcagattctcgacatggatgaggtcgctgcgatcggtcaggcgctg
gagcccaatcactcgctggatgacggacaactcgctggtgcagccgcgatcggtggcaca
tcgcgcaacgtcgtcatctccggtccagccggcaccggaaagaccacaatgctcaaagtc
gcgggcgctgccctgcgcggacgcggccacaagatgatcatcgtcgcgccaaccaagaag
gcctccgctatagcgggacgcgagacgatgagttcatcggcgtccctccaccaacttctt
cacgagttcggatggcgctgggcgactgccgagtctggcgcaacggtgtggcggcggctc
tccatcggcgacgtggattcgacgccaggcggcgtctatcgcggacctcgaacccgcatc
aatcctggtgatcgcatagtcgtcgatgaggccggcatgttggacctcgaggccgcgacc
gcgcttcttgacgtcgcgcatgacaatggcgcgggagtcgctctcgtcggggatcagcga
caggcgttgccggtcggacactcgggcgccatggcgctgttctggcatcggtcatcgcgg
cgcgtcgagctcacaactacccaccgcttcaacgaccaactctgggccgatctcatgctg
cgactccgccacccagacggcgacgacgagaggcgcgaggtcgccgaggacctcgtgcga
acagatcatgtcgtaatgacggataacgacgtcgccgcacgcgaggcgatggtcgaagga
tggttcgacgccacccgccttcacgagacgatcgcgttagtcaccgcgacacacgccgaa
gcgcaggagatcaacgaagcgatccaacgtcgacggatcgaatacggggcgatccgccct
ggccaagccttttccgggcaatctggacagccgattttcgtcggtgacgttgtccagacc
cggcgcaacgacagtgccgctgacgtgcagaaccgccagaactggatcgtaaaagcgatc
ggcgacgaccatgtgatcctcacagcgagcaccaacacgaccgacctgcggaaagtcagc
ctcgcttacgcccgagagcatattcacctcgcctacgccacgaccgtctacggagtccaa
ggtgaaacgaccgaccggtcgctcgtgggacccggagtcgatgcagctggtctgtacgtc
ggcctcacccgcggcaaaacagacaacgcagcggtgctagttgctccgaccgagacctcc
gcaaagtatcagctggtcgagatgatgcaacgccaaacgctggaagagaccatggacaag
tcgcgagacgcagcgcagaccgaactcaggcgggctgcccattcgcccaccggtccgatc
atcccagcgggcggcgcccaacgcacctcggttggactcaagtga
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