Leifsonia sp. PS1209: HF024_16640
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Entry
HF024_16640 CDS
T06547
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF024_16640 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leif03019
]
HF024_16640 (recQ)
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_16640 (recQ)
Enzymes [BR:
leif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF024_16640 (recQ)
Messenger RNA biogenesis [BR:
leif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HF024_16640 (recQ)
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HF024_16640 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIZ99972
UniProt:
A0A6H1W8G2
LinkDB
All DBs
Position
complement(3488555..3490546)
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AA seq
663 aa
AA seq
DB search
MSWNAEHPWEPDERDAPPEYPEEAFPPDDAYLGGAVEFGGGAATSTRVAAPQREVRASTA
KFASPAEALHTVFGYDSFRGEQAQIIDQLVDGGDAVVLMPTGGGKSLCYQIPSLVREGTG
VVISPLIALMQDQVDALTAVGVRAAFLNSTQDSAERSRVENAYLSGELDVLYVAPERLSS
DATKRFLSGGKIALFAIDEAHCVSQWGHDFRPDYLALSELGERWPEVPRIALTATATEAT
HREITERLGMQKAAQFVADFDRPNIQYRIVPKVEVRKQLLDFITTEHPNDAGIVYGLSRN
TVERTAEFLSARGLNALPYHAGLDARVRAQTQARFLREEGVIVVATIAFGMGIDKPDVRF
VAHIDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRRMIDDSPGDLAHRRRMTQ
HLDAMLALCETVQCRRVNLLNYFGQRAEPCGNCDTCLTPPESWDGTVPAQKLLSTVVRLK
RERNQQFGAGHLVDILRGKRTPRVEQHGHDALATWSIGADLSESQWRGVVRQLIAQELLK
PEGEYGVLAITPQSAAVLAGDRPVVLRREPDRPERPARAARSAAAAADLEPADHPLFEAL
RAWRAEAARSQGVPAYIVFGDATLRAVASAKPATLGDLDGITGIGAKKREAYGEALLEVV
ASA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagttggaacgcggaacacccctgggagccggacgagcgcgacgcgccaccggagtat
ccggaggaggcgttcccgcctgacgacgcgtacctcggcggggcggtggagttcggtggc
ggtgcggctacgtcgacgcgcgtggcggctcctcagcgggaggtccgagcatccacggcc
aagttcgccagcccggccgaggcgctgcacacggtgttcggctacgactcgttccgcggg
gagcaggcccagatcatcgaccagctcgtcgacggcggcgacgccgtggtgctcatgccg
acgggtggaggcaagagcctctgctaccagatcccgtcgctcgtgcgcgagggcaccggc
gtcgtcatctcgccgctgatcgcactcatgcaagaccaggtggatgcgctgaccgccgtc
ggcgtgcgcgccgccttcctcaactccacccaagactccgccgagcggtccagggtcgag
aacgcctacctctccggcgagctggatgtgctctacgtcgcgccggagcggctgtcctcc
gacgcgaccaagcggttcctctccggcggcaagatcgcactcttcgccatcgacgaggcg
cactgtgtctcccagtggggccacgacttccgtccggactacctggcgctgtccgagctg
ggggagcgctggccggaggtgccgcgcatcgccctcaccgccacggccacggaggcgacg
caccgcgagatcaccgagcgcctcggcatgcagaaggcggcgcagttcgtcgcggacttc
gaccgtccgaacatccagtaccgcatcgttcccaaggtggaggtgcgcaagcagctgctc
gacttcatcaccacggagcacccgaacgacgccggcatcgtctacggcctgtcgcgcaac
acggtggagcgcacggccgagttcctcagcgcgcgcggcctgaacgccctcccgtatcac
gcgggactggatgcgcgagtgcgcgcccagacgcaggccaggttcctccgcgaggagggc
gtgatcgtggtcgccaccatcgcgttcggcatgggcatcgacaaacccgacgtgcggttc
gtcgcccacatcgacctgcccaagtcggtcgagggctactaccaggagaccggccgcgcc
ggccgcgacggcctgccgtccaccgcctggctcgcctacggcctgcaagacgtggtgcag
cagcgccgcatgatcgacgactcgcccggcgacctcgcccaccgccgccgcatgacgcag
cacctggatgcgatgctcgccctctgcgagaccgtgcagtgccgccgcgtcaacctcctg
aactacttcggtcagcgcgcggagccgtgcggcaactgcgacacctgcctcaccccgccg
gagagctgggacggcacggtccccgcccagaaactgctgtcgaccgtggtgcgcctgaag
cgcgaacgcaaccagcagttcggggcaggccacctcgtcgacatcctgcgcggcaagcgc
accccgcgcgtcgagcagcacggccacgacgcgctcgccacctggagcatcggcgccgac
ctcagcgagagccagtggcgcggggtcgtgcggcagctgatcgcacaggaactgctgaag
ccggaaggcgaatacggcgtgctcgcgatcacaccgcagagcgccgcggttctcgccggg
gaccgccccgtcgtgctgcgccgcgaaccggaccgcccggagcgcccggcccgcgccgcc
cgctccgcagcggctgccgccgacctcgaaccggcagaccaccccctgttcgaagccctc
cgcgcctggcgggcagaggcggccagatcacagggcgtccccgcatacatcgtcttcggc
gacgccaccctccgcgccgtcgcctccgcgaagcccgccaccctcggcgacctcgacggc
atcaccggcatcggcgccaagaagcgcgaggcctacggcgaggccctcctggaagtggtg
gcgtcggcgtag
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