Leifsonia sp. PS1209: HF024_18805
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Entry
HF024_18805 CDS
T06547
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
leif
Leifsonia sp. PS1209
Pathway
leif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF024_18805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA14
GLEYA
TEN_YD-shell
RHS_repeat
Ig_Rha78A_N
Motif
Other DBs
NCBI-ProteinID:
QJA00348
LinkDB
All DBs
Position
3925131..3931997
Genome browser
AA seq
2288 aa
AA seq
DB search
MYQNQDSTKTAQFSTEPLNVSRSDGSWVPVNTTATKTSSGGYAVADHPLAPKFAATSGSS
SGDYQVSSSSYTVSFSLEGAKPRPATRASAVDRTASGGDSDSSVAYTGVAAGEDLAYEVT
AGQVKETLVLNQAPTEANPSWTWKVHAPGLQLGRDQFGDVTFTDVLGNVVFITPIPAMVD
SSAVPGVSGAAVTNVPVSLAQVSDDDWTMTLTPDATWLNDPSRVYPVFVDPSTASPYADD
AHSYESTGSQLTGVAYVGNSRASGDTMWRTVTHFNYEQLFGYQVLGVNLEEWYGGDGSTD
ATNAWVFWANAMSFNGQGTTLSPITVSSGTSGYGVANDARLTNQYATWVNNRTSGAYLML
TGQETPGAYTYKSLGLQMFISYESKPTIAASTVSVADPNGFAATSSSPQGGAVGSSTPTL
ATTTTQDTSNGSAPVNRWYSVSANANMSSPLWQSGWTSSSQVQVPPGMLAPGATYYWQAA
VQDQYGTTGSSSIYSWKTSTNPTPGAGATTPSDNSVVATTTPTLTAPAATATNGKPLQYV
MRLASGQDGATGQVVLSQVLTPVGGVLTWTVPANVLQDNTGYTWSLVVNDVYDDWAASVQ
RIVVNRRVTTSGPAPTDTAGPVTVNLANGNASTSVPTPTVNTVGGPMGFQLTYNSEQVSN
AGLISHYYNLDPNNLTPSYNPLPAGAKVALVQTDSQIADNWGQLDSPAPGVNQSNYQVQW
TGFINPPAGSYAFGFQSDDGAELTLNTTPVITDQWTAHQAQGTPQFETAASQVLVVAADG
TAKLGGATVPLPLPITVNYFQRSGAASVSLSVESTIAPANPQLVPANWFTHTNPPLPDGW
AASAPIVGAAGQYVSLKTSGSSVTVTDSAGGTHVYTKAAGAGGYTPPAGERSTLTTDTTG
AFTLTAEDGTVYLFNTAGKLTSATPPVDAGSKPATPIPSYVSNSSLDNALRSLSDPLSNT
GTASAPSYQRAAYFAYKGEQYSNLGIPANAGITATGPVCQTPSGTGWAAAPDQMMCAIVY
PDGTTTQLEYTSTGQLGGVLNPGGALTLFSYQAVGGSNLLSAVSTSLQTDWSALHTSSPR
PVTAIGYDTAGRATSVKLAALGSDPQPSKTYTYSSAPTATQDGISFVDVAGLTPPAGGPG
HELKVTYNTALQKTTSTTASGLISKTLWNSHDNVLATLDAQGHESSTVYDTQDRAVATYG
PAPAACFGATAALPFGPSTLDANGTADPADAPIPTGTCPAMNGTAIATSTSTYDGTLHGL
NATWYNNSNLAGPPAAYSLSVPAAASTPATPENNGAISHDWGTTNGASTTVSPITGPTGT
VVGGSTGINWTAQFTGLLTFPSTANYTLYTYADDGTMLWVNDKLVINTWGGGSARYSAGY
TIPATLGQTVRIRLAYQQMTAQAHLELDWTTGAALPTAPANNVAIPGADLSPAYNLVTKT
STADSAPTGVAGVSNANVPAASTATTYSNPWFGTVASTSVDSAGLNLTSTSTTEAPGTGY
LRQLTSTKPAGAATKSTTAYYGGTSTPTVSYGTALGVSSPICGVPVNTPQYGLTASATGP
TPATGVARTAKYVYDVMGRVAATLNPGDTTWACTTYDSRGRIASQTFPAFGGSPARTVTN
KYTSDGTATGDPLTSSVSDASGTITSTIGIDGQRLTYTDVSGTVTTTSYNQAMQTVSATA
KLADGTTHTEAYTYNGDGQALTVSEDSKTIAQNTYTGGVLTGVAYPSGAGNAGNGTSGTL
GYAPTGAASSLVWSLAGGATLSDSHVLSQTGRIVQDTIVDGAATYTSTYGYDGAGRLTSA
KVPYNQLTYSYAATGGCGANTTAGADGDRTGMTDITTAPGASTPNPTLSMGYCYDNTDRL
TADTVSGAPTSPDIVLGTALTSTGATPNLVYDSHGNITKLATETLAYDDTNRHMNTTLSD
GTTIVYKRDATDRIISVTQTPAGGSATVTNYAYAGGGDAAAFTLTSANHVQEQTLSLPGG
ASVSIQSSTQVWSYAGLSGHVIATADAAGTRVGGIFLTDPYGDPIDPATGCIGTTTADTN
GPANTTTPNVSNGYEGQHGKGMLTLGGLDTIEMGARQYVPLLGLFLSVDPVPGGNANDYT
YPNDPVNSNDLTGNYSFRLSDYGTTTPIVGSTARTAYSPHVNRGIKASSYRATRPLSSYS
MPELLAKYNGKQAILNHEPPAPEWVKKVGVGAGASLCALACVNVDVGADGHGRVGLGVGP
EAGIKYKIGFTTETEPGWYMGGDCSAGLGPVGAYVEGGIQEHGPLGYGGGGYSPGLNLGC
SGGVGWGW
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcagaatcaggattcgacgaagacggcgcagttctcgacggagccgttgaatgtg
tcgcggtctgatggttcgtgggttccggtgaacacaacggcgacgaagacgtcgagtggc
gggtatgcggttgcggatcacccgttggcgcctaagttcgcggcgacgtctggttcgtcg
tccggtgactatcaggtctcgtcgtcgagctacacggtctccttcagtttggagggggcg
aagccgcggcccgccacgcgggcgagcgcagtcgatcggacggcgtcgggtggcgattcc
gactcgtcggtcgcgtacacgggcgtcgcggctggtgaggatctcgcgtatgaggtcacg
gcgggccaggtgaaggagacgttggttctcaaccaagctccgactgaggccaacccgtca
tggacatggaaagtacacgcacccggcttgcagcttggccgggatcagttcggggacgtt
accttcacggacgtcctgggcaatgttgtgttcatcacaccgattcccgcgatggtcgac
tcttcggccgtccccggcgtctccggggctgctgtgaccaatgtgcccgtctccttggct
caggtgtccgatgacgactggacgatgacgttgaccccggacgcgacgtggctgaacgac
ccgtcccgggtgtatccggtgttcgtcgacccgtccacggcctccccctacgcggatgac
gcgcattcttatgagagcacgggctctcagttgactggtgtcgcctacgtcggaaattcg
cgagctagcggagacacgatgtggcgtacggtcacccacttcaactatgagcagcttttc
gggtatcaggttctcggagtgaacctagaggaatggtacggcggcgacggctccactgac
gcaacgaatgcgtgggtgttctgggcgaatgcgatgagtttcaacggacaggggaccact
ctgtcaccgataactgtctcgtccggaacctcaggctacggtgtcgcgaacgatgctcgt
ctgacgaatcagtacgcgacgtgggtgaacaatcgcacgtcgggcgcgtacttgatgttg
accggccaggaaacgcctggggcgtacacgtacaagtcgctcggcttgcagatgtttatc
tcgtatgagtcgaagccgaccatcgcggcgtcgacggtctccgtcgcggacccgaacggg
ttcgcggcgacgtcgtcgtccccgcagggtggagcggttgggtcgtcgacgccgacgttg
gcgacgacgacgacgcaggacacctcgaatggttcggcgccggtgaaccgatggtattcg
gtgtcggcgaacgcgaacatgtcgagcccgttgtggcagtccggatggacgtcgagttcg
caagtgcaggtgccgcccgggatgctcgctccgggagctacgtattactggcaggcagcg
gtgcaagaccagtacgggacgacggggtcgagttcgatctattcgtggaagaccagcacg
aatccgacacccggtgccggggcgaccacaccatcagataattcagtggtcgcgacaacc
acaccgacgctcaccgcaccggcggccacagcaaccaatggcaaaccgttgcagtatgtg
atgaggctcgcgtccgggcaggacggggcaacagggcaagtggtgctttcgcaggtgctg
actcctgtcggcggcgtgctgacctggacggtgcccgcgaacgtcctgcaagacaacacc
gggtacacctggtcgctcgtcgtcaacgacgtgtacgacgactgggcggcaagcgtgcag
cggatcgtcgtgaaccggcgagtcacaacatccggaccagcccccaccgacaccgccggg
cccgtcacggtcaatctcgccaacggcaacgcctccacaagtgtgcccacaccaaccgtg
aacacggtcggcggcccgatgggcttccaactgacctacaactctgagcaggtgtcgaac
gctggtctgatcagccactactacaatctcgatcccaacaatctgactccctcgtataac
cctctgcctgcgggggcgaaggtcgcgttggtacaaacggacagtcagatcgctgacaac
tggggtcaactcgattcaccagcaccaggagtgaaccagtcgaactatcaggtgcaatgg
acggggttcatcaacccgcccgcgggctcgtacgcgttcggcttccaaagcgacgatggc
gctgagctcacactaaatacgacaccggtgatcaccgatcagtggacagcgcaccaggcg
cagggaaccccgcaattcgagaccgcggcctcgcaggtccttgttgtcgccgccgacggg
acggcaaagttgggcggcgcgacggtgccgttaccgctgccgatcacggtgaactacttc
cagcgcagcggagcagcctcggtgtccctgtccgtggagagcaccatcgcgccggccaat
ccgcagctggtcccggcgaactggttcacgcacacgaacccgccgctcccggacgggtgg
gccgcatccgccccgatcgtcggagcggcaggtcagtatgtgtccttgaagaccagtgga
agttcagtcaccgtcacggactccgccggcggcacccatgtgtacacgaaagcggccggg
gcgggcgggtacacaccgccggcgggggagcggagcacgctgaccaccgacacaacggga
gcgttcaccctcaccgccgaggacggcaccgtgtacctgttcaacacggcggggaagctc
acctccgcaaccccaccggtagatgcgggcagcaaaccggccactccgatccccagctat
gtcagcaacagcagcctggacaacgcgctccgcagcctgtccgacccgctctccaacacc
ggcaccgccagcgccccctcataccagcgggccgcgtacttcgcctacaagggggagcag
tactcgaacctcggcatcccggcgaacgcgggtatcaccgccaccggaccggtctgccaa
acgccgtccgggaccggctgggcagcagcacccgatcagatgatgtgcgcaatcgtgtac
cccgacgggacaacgacacaacttgagtacaccagcaccggtcaactcggcggggtgttg
aacccaggtggtgcgctcaccctgttcagctaccaggccgttggtggatcgaatctactc
agcgccgtgtccacctcgttgcaaacggattggtcggccctgcacaccagctcgccgcgg
cccgtcaccgcaatcggctacgacacggcagggcgggcgacgagcgtgaagctcgcggcg
ctcggcagcgacccgcaaccatcgaagacgtacacgtactcgtcggcgccgacagcaacc
caggacgggatctcgttcgtcgacgtcgcagggctcaccccacccgccggtggcccaggt
cacgagctcaaagtcacctacaacacggctctacagaagaccacgtcaacgaccgcatcc
gggctcatttccaagacactgtggaacagccacgacaacgtcctcgccaccctggatgcc
caaggccacgaatcaagcactgtctacgacacccaggaccgcgccgtagcgacctatggt
ccggcacccgccgcctgtttcggcgccaccgcagcgctcccgttcggcccatccactctc
gacgccaacggaacggcagacccggcggacgcgcccatcccgaccggaacctgcccggcc
atgaacgggacagcgatcgccaccagcacctccacgtacgacggcactctgcacggcctc
aatgcgacctggtacaacaacagcaacctcgccggcccgcccgccgcgtactcgctgtct
gtgcccgcagcagcctccacccccgccacccccgagaacaacggagcaatcagccacgac
tggggaaccaccaatggcgcctccaccaccgtctcacccatcacgggcccgaccggaacc
gtcgtcggcgggtcgaccggtatcaactggaccgcacaattcaccggcctgctgaccttc
ccgtcgaccgcgaactacaccctgtacacgtacgcggacgacgggaccatgctctgggtc
aacgacaaactcgtcatcaacacctggggaggcgggtccgcccgctactcagccggatac
acgatccccgcgacgctcggtcagacggtacgcatccggcttgcctaccagcagatgact
gcgcaagcacacctcgagctggactggacgacaggggcggcgctgcccacagcccccgcg
aacaatgtcgccatcccaggcgcagacctctcacccgcctacaatctcgtgacgaagacc
tccaccgccgactccgccccgaccggcgtggccggggtcagcaatgccaacgtgcccgcc
gcgtccacggcgaccacatactcgaacccctggttcgggacggtcgcctccaccagcgtc
gactcggctggactgaacctgacatccacgtcaacaaccgaagcgcccgggaccggatat
ctgcgtcaactcacgtcgacgaaaccggccggcgcggcaacgaaatcaacgaccgcctac
tacggcggaacgtcgaccccgacggtttcctacggcaccgccctcggagtgagcagcccg
atctgcggggtacccgtgaacaccccgcaatacggtttgaccgcatcagcgaccggtccc
acaccggccacaggggtggcccggacagcgaagtatgtgtacgacgtcatgggtcgcgtc
gccgcaaccctgaaccccggtgacaccacctgggcatgcaccacctacgacagccgcggc
cggatcgcatcccaaaccttccccgcgttcggcggatcccccgcgcggaccgtcaccaac
aagtacacatccgacgggaccgccaccggtgaccccctcacctctagcgtgtccgacgcc
tccggaaccatcaccagcaccatcggcattgacgggcaacggctcacgtataccgacgtg
tccgggaccgtgaccaccaccagctacaaccaggctatgcagaccgtctccgccacggcg
aagctcgcggacggcaccacccacaccgaggcgtacacctacaacggtgacgggcaggcc
ctcaccgtctccgaggacagcaagacgatcgcccagaatacctacacgggcggagtcctc
accggcgttgcctatccctccggggctggcaacgccggcaacggcacctccggaacgctc
ggctacgcaccaaccggcgccgcctcatcgctggtatggagtctcgctggcggggcgact
ctctccgacagccacgtgctatcgcagacggggcggattgtgcaggacaccatcgtcgat
ggtgcagccacgtacacgtccacatacgggtacgacggcgcgggcaggctgacctccgcg
aaggtcccgtataaccagctcacctactcgtatgcagcgacaggcggctgcggtgccaac
acaaccgcaggcgcggacggtgaccggactgggatgacggacatcaccaccgcacctggt
gcgagcacgccgaatccgaccctgtcgatggggtattgctacgacaacacggacagactc
accgccgacaccgtgagcggcgcgccgaccagccccgacatcgtcctcgggactgcgctc
accagcactggggctaccccaaatctggtctacgacagccacgggaacatcaccaagctc
gcgaccgagactctggcctacgacgacaccaaccgacacatgaacaccacgctctccgac
ggcaccaccatcgtctacaaaagagacgcaaccgaccggatcatcagcgtcacccaaacc
ccggccggtggtagcgcaaccgttaccaattacgcctacgcgggtgggggagatgcggcc
gcgttcacactcaccagcgctaaccacgtccaggagcagacactcagcctccccggcggg
gccagcgtgtccatccagtcgagtacgcaggtgtggtcgtatgccggcctcagcgggcac
gtgatcgcaaccgcggacgctgcgggtacgcgagtcggcgggatcttcctcaccgaccca
tacggcgaccccatcgaccccgccaccgggtgcatcggcaccacaaccgccgacaccaac
ggacccgcgaatacaactaccccgaacgtgtccaacggatacgaaggacaacacggtaaa
ggcatgctcaccctcggcgggctcgacaccatcgaaatgggtgcacgccagtacgtgccc
ctcctcggcctcttcctctccgtcgaccccgtcccagggggcaacgccaacgactacacc
tacccaaacgaccccgtcaacagcaatgacctcaccggtaattactcattccgtttatcg
gactacggcacgaccacgccgatcgttggctcaaccgcgaggacggcctattcccctcac
gtgaaccgcggaatcaaggcatcgtcctatcgtgcgacgcggccgctgtcgagctactcc
atgccagagctgcttgcgaaatacaatggaaaacaggcgattctgaatcacgagccgcct
gcgccagagtgggtgaagaaggtgggcgtaggcgcgggtgcgagcttgtgcgcactggcg
tgcgtgaatgttgacgtcggagcagacggtcacggtcgcgttggtctgggcgtcggaccg
gaggccggaatcaagtataaaattggcttcaccacggagacggagcccggttggtatatg
ggcggtgactgttcggccggactgggacccgtcggtgcttacgttgaaggcgggattcaa
gagcacggtccgctcggctatggtggcggagggtactcacctggactaaaccttgggtgc
agtggcggcgtcggatggggttggtga
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integrated database retrieval system
