Leifsonia sp. PS1209: HF024_19560
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Entry
HF024_19560 CDS
T06547
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF024_19560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leif03019
]
HF024_19560
Enzymes [BR:
leif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HF024_19560
Messenger RNA biogenesis [BR:
leif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HF024_19560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QJA00482
UniProt:
A0A6H1WC63
LinkDB
All DBs
Position
complement(4074500..4075927)
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AA seq
475 aa
AA seq
DB search
MHSVADSLARLGDLARSATVATLASAFSGAGYELALVGGPVRDALLDRPVHDLDFTTDAR
PDDILRVVSPLADAVWDIGRQFGTIGARFGDDTVEITTYRTDSYDGETRKPDVEFGDTLE
GDLLRRDFTVNALALRIPEVKLVDPSGGVEHLLSRTLTTPSTPAVSFGDDPLRMMRAARF
TSQLGFTVDDETKDAMAELAGRIEIVSAERVRDELSKLLCTDDPRPGIELLVATGLAAQV
IPEIPALRLEIDEHHHHKDVYQHSLTVLDQAIGYEKERHPGEAPDLVLRLAAILHDIGKP
ATRRLEPGGVVSFYHHDVVGAKLAKKRLTALRFDKATIDSVSRLIELHLRFFGYADAHWT
DSAVRRYIRDAGPELERLHMLTRADVTTRNRRKADRLGFAYDDLEARIAELKEREELDAV
RPDLDGEQVMRILGLKPSREVGQAMKFLLELRLDDGPLGEEEATRRLLEWWDAQH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgtcgccgattccctcgcccgcctcggcgacctcgcccgttcggcgaccgtc
gcaacgctggcctccgcgttctccggagcgggctacgagctggcgctggtcgggggtcct
gtccgggatgctctgctcgaccggccggtgcacgacctcgacttcacgaccgacgcgcgg
ccggacgacatcctgcgtgtcgtgtccccgctcgccgacgccgtctgggacatcggccga
cagttcggcacgatcggcgcgcggttcggtgacgacacggtcgaaatcaccacataccgc
acagacagctacgacggcgagacgaggaagccggatgtggagttcggcgacacgctcgaa
ggcgacctcctccgccgcgacttcaccgtgaacgcgctcgccctgcgcatcccggaggtg
aagctggtcgacccgtccggtggtgtcgagcacctgctgagccgcacgctcacgacgccg
agcacccccgccgtctcgttcggcgacgacccgctgcgcatgatgcgcgccgcccggttc
acgtcgcagctcggcttcaccgtcgacgacgagacgaaggatgcgatggcggagctcgcc
gggcgcatcgagatcgtgagcgccgaacgggtgcgggacgagctcagcaagctgctctgc
acggacgaccctcggccgggcatcgagctgctggtcgccaccggcctcgccgcccaggtc
atcccggagatcccggcgctgcggctggagatcgacgagcaccaccaccacaaagacgtc
taccagcacagcctcacggtgctcgaccaggcgatcggctacgagaaggagcggcacccc
ggcgaggcgcccgacctcgtgctgcggttggcggcgatcctccacgacatcggaaagccg
gcgacgcgcaggctggagcccggcggcgtcgtcagcttctaccaccacgacgtggtcggc
gcgaagctcgcgaagaagcggctcaccgcgctgcgattcgacaaggcgaccatcgactcc
gtctcccgcctgatcgagctgcacctgcggttcttcgggtatgcggacgcgcactggacg
gactccgccgtgcgcaggtacatccgggatgcggggcccgagctcgaacgcctgcacatg
ctcacacgtgccgacgtcaccacccgcaaccgccgcaaggccgacaggctcggtttcgcc
tacgacgatctggaagcgcggatcgccgagctcaaggagcgggaggaactggatgcggtg
cgtcccgacctcgacggggagcaggtcatgcgcatcctgggcctcaagccgagcagggag
gtgggtcaggcgatgaagttcctgctggagctgcggctggacgacggcccgctcggcgag
gaggaggcgaccaggcggctgctggagtggtgggacgcgcagcactga
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