Leifsonia sp. McL0608: AAYO93_09760
Help
Entry
AAYO93_09760 CDS
T11523
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
leil Leifsonia sp. McL0608
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6443
Motif
Other DBs
NCBI-ProteinID:
XAO70366
LinkDB
All DBs
Position
complement(2064905..2071231)
Genome browser
AA seq
2108 aa
AA seq
DB search
MAKARFQLRKLTVAVAVIAVGTLGLTGFTPPVAPAEKASTVSVNRGPKVPGHHAAPISAH
PSPASNRSAAPATGQLPAPGDFQTNTPLAGTLTPLTTYGGSGLKRGQWQNLGDTGIAVAA
TTPSQTAAPRTKGTIDNPVASVKATILDPAEAKKFGLKGLVIKLSRTDAATTAAPVAVRI
PNKLLNSLYGADYASRLKWVQVDGANPAATATAAASATSTKTASPASAQPVPMTMDMASS
AVVATPMLSAEPMLLAATAGPISSTGTGSFTATPLKPSSTWDVSAQTGDFSWSYPFRVPP
AAGGPAPSVSVNYDSQSIDGETGSTNNQASAIGDGWSLAGAGFIERSYVSCASDTVPVTT
SGDLCWKTDNATISFAGHSGQLVKDTTSGTWKLQNDDGTKFERFPAAAGCGTGGAFDGDY
WKMTTRDGTQYFFGKNQLPGWVSGKPTTNSTWTVPVFGNDAGEPCHASTFAASSGLQAWR
WNLDFVLDTHGNAESFYYNAQTNIYSKNKTTATAYTRGGELEHIDYGFTSTTTSGNAYAT
NAASGKVVFGYDPYGRCSDATHANCTSEPASGYATTPAHPTYYPDVPFDQNCITGTCTAF
VSPTFWTTSMLSTVTTKALVAGAYSNVDVWTLGHSFPPTGETANPALWMTQISHTGYAGT
ASLTEPTTTFTGATMTNRVLTTGSGLSPLARYRITTLQTSLGAVISINYSAAQCGAADVA
PINAAPATNTKRCFPQLWTPQVTPPQAPQTDLFHKYVVNSVVSNPGTGNGMDQTQETDYV
YTGLPAWRYNNSPLIPDNARTWNVFAGYNTIEIRVGAPGAPTLQQTTDYTFYQGLDGDRA
GISGGTKSVSVTGSPGVPDSLWFAGRTREAKTVNGVGGATLSDTVTTPWASAVTANNGVI
TARLTGDGDVLTTEPVSTGGNRTVHTVNTLDPATGLPTQVSVAPSDTPHTCTTTSYLSNS
AVGIIGAPYEIKKVGVDCTLLASASYPADLISDTRTAYDTAAFGIAPTKGDPTETDTVDA
YVSGAPTWAKMARTTYDSMGRPLVATDVLGHTTTTAYTPAAGAAAGSGATTSTTVTNTAP
FGWPVTTVIDPRWGVETKVTDQNGKATTATYDALGRRTAVWLTDHTKASFPTAPSIGYAY
TLSKTVPNTVATTTLAPTNTMTSYQLFDGLGLPIQTQAPSAANGTIVTDTMRDSAGRVRL
TNSAYWTTAAAPSATLFVPSSESAIPDETTTSYDGAGRPTATTVFSLGVQRSQTTVAYTG
ADRVDTTPPGGGTPTTQISNSLGQQTQLTQYLNSTPTGSATETTSYSYTVQGKMAGMVDP
AGNHWGWSFDVLGHQTSAVDPDTGTTTSSNDDAGNLLTSTDARGVTLAYTYDALNRKTSE
HTGTTTGPILAAWTYDTAAKGQPDASTSYVGSTSTTPGAAYSSTVTGYDAGYRPTGVTVS
IPAGAPAFAGTSYTTGLQYYQNGALGEASYPAEGGLAAEDVLTAYNSEGHASGLSSADTI
VGGVFYTGINQIAQIHRTGTAGLDSNYQYDPATGAPTDIKDATTIGTTTVTQADRVYSHN
PVGDVTAIKTTGAAGADSQCFSYDYLHDLTQAWTPNSNDCTAAPTATTIGGAAPYWTNYT
NDPATGNRTKVTNNPTTGSGTPTTDSYAYPTAGTANPHAVQSVTHTAGTGSTDTYGYDQI
GNTTTRPGQTLTYDATGKLATVTTSGVTQSNIYDANGTLLMQTDPTNGTTLFLGDTELQV
AAGSSTPSAVRTYSVNGIPVAERSSTAGVSGSQLCFLGVDANHTADLEIDARSGVLSRRF
IDPYGVPRGATSLPWSSTHGYLNAPTSSQSDLTHLGSRAYDPVTGRFLSVDPVLAPFNPQ
QNNGYRYAGDNPITMSDPSGNCTQGATDSLDFNSNCAGGYGTNAPGAGPAYQAPIPISDS
GHGGKPPKSDEPKDSPYVDGCESPNVASCLRPPKTVQPIQVCVGMNLSSACRPALPGEGG
PGHVTCISAQASSIVVGASGSICNFQLGNFDSTNTAGGDFTLGPTTKLGASIGVGFGYTN
ATSRADIDSLTWLATGDYATGLGVGGTYSWGFNAKGDYIWMALVSGEVGVGGGLSAGGGT
SCRLGETC
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggctcgctttcagctacgcaaactgactgttgcggtggcggtgatcgctgtg
ggaacgctcggactgaccgggttcacccccccggttgctcctgccgagaaggcctcaacc
gtctcggtcaatcgggggccgaaagtgcccggccaccacgccgcaccgatcagtgcccac
ccgtcgcctgccagcaaccgatcggcggcacccgccaccggtcagctccctgcacccggt
gacttccagacgaacaccccgctcgccggtacgctaaccccgttaaccacttacggcggt
agcgggttgaagcgcgggcagtggcagaacctcggtgacacgggtatcgcggtggccgcc
accacaccctcccaaacggcggcaccgcggacgaaaggcacgatcgacaacccggtggcc
tcggtgaaggcaacgatcctcgacccggccgaggcgaagaagttcgggctgaagggtttg
gtgatcaagctctcccgcaccgacgcggcgaccaccgcagccccggtcgccgtgcgcatc
ccgaacaaactgttgaacagcctctatggggccgactacgcgtcccggctgaagtgggtg
caggtcgacggggcgaacccggccgccaccgccacggcagcagcctcggccacgagtacg
aagacggcatccccggcatctgcacagccagtgccgatgactatggatatggcgagctcg
gctgtggtggccaccccgatgctgagtgcagagccgatgctgctagccgcaacggcgggt
ccgatctcctcgaccgggaccggttctttcaccgccaccccgttgaagccgtcgtcgacg
tgggatgtgtcggcgcagaccggcgacttctcctggtcctacccgttccgggtaccgccg
gctgcggggggaccggcgccgtctgtctcggtgaactatgactcgcagtcgatcgatggg
gagaccgggtcaacgaacaaccaggcgtccgcgatcggtgacggttggagtttggccggg
gccgggttcatcgaacgcagctatgtatcgtgtgcgtccgacactgtaccggttaccacc
tctggtgatctgtgttggaaaaccgacaacgcgacgatttctttcgcagggcattccggg
cagctggtcaaagacaccaccagcgggacctggaagctgcagaacgatgacggcaccaag
ttcgaacgtttcccggcggccgcgggctgtggaaccggtggggcctttgacggcgactac
tggaagatgacgaccagggacggcacccagtacttcttcgggaagaaccagctacccggc
tgggtgagcgggaagccgacgacaaactcgacctggaccgtgccggtgttcgggaacgac
gctggggaaccgtgccacgcgtctaccttcgccgcgtcgtctggtttgcaggcctggcgg
tggaaccttgacttcgtcctcgacacgcacgggaatgcggaatcgttctactacaacgcg
caaacgaacatctactcgaagaacaaaaccacggccaccgcttacacccgcggcggcgag
ctcgagcacatcgactacggcttcacctccacgaccacttccggcaacgcctacgcgacg
aacgccgcatccggcaaggtcgttttcggctacgacccgtacggtcggtgctccgacgcg
acgcacgcgaactgcacttctgagccagcctccgggtacgcgacaacgccggcacatccg
acttactacccggatgtcccattcgaccagaactgcatcaccgggacttgtactgcgttc
gtttcgcccaccttctggaccacctccatgctgtcgacggtcaccacgaaagcattagtt
gccggcgcgtattcgaacgtggacgtgtggacgttggggcattcgttcccgccgactggg
gagacggcgaacccggcgttgtggatgacccagatcagccacaccgggtatgccggcacg
gccagcctgaccgagccgacgacgacgttcaccggcgcgacgatgaccaaccgggtcctc
acgaccggcagtggtttgtcgccgctggcccggtaccggatcaccacgttgcagacctcg
ctcggcgcggtcatctcgatcaactattcggccgcccagtgcggtgcggcggacgtcgcc
ccgatcaatgcggcaccggcgacgaatacgaaacggtgcttcccacaattgtggacgccg
caagtcacgccaccgcaggcgccgcagacggacctgttccacaaatacgtcgtcaacagt
gtggtctccaacccgggcaccgggaacgggatggaccagacccaggaaaccgactacgtc
tacaccggactgccggcctggcgttacaacaactccccactgatccctgacaacgcccgc
acctggaacgtgttcgccggctacaacactattgagatcagagtcggtgcccctggcgcc
cccaccttgcaacagaccaccgactacaccttctaccagggtctcgacggcgacagggcc
ggcatctccggcggcaccaaatccgtcagcgtcaccggctcgcccggtgtgcccgactcg
ctctggttcgccggtcgcacccgggaagcgaaaacggtgaacggggtcggaggggccacc
ctcagcgacacggtcaccaccccgtgggcatccgcggtcaccgccaacaacggggtcatc
accgcccggctgaccggcgacggcgatgttctcaccaccgaaccggtctccactggcggc
aaccgcaccgtacacaccgtcaacactcttgacccggccacagggctccccacccaggtc
agcgtcgcgccctccgacaccccgcacacctgtaccaccaccagctacctttcgaacagc
gccgtcggcatcatcggcgccccgtacgagatcaagaaggtaggggtggactgcaccctg
ctggcctccgcctcctacccggcggacctgatcagcgacacccgcaccgcttacgacact
gccgcgttcggcatcgccccgaccaagggagacccgaccgaaaccgacaccgtcgacgcc
tacgtttccggcgcccccacctgggcaaaaatggcgcggaccacttacgacagcatgggc
cgcccgctcgtggccaccgatgtcctcggccacaccaccaccaccgcgtacacccccgcg
gccggtgccgccgccggatccggcgcaaccacctcgacaaccgtaacaaacacggccccg
ttcggttggccggtcaccaccgtgatcgacccgcggtggggcgtcgaaacaaaggtcacc
gaccagaacggaaaagccaccaccgccacctatgacgcgctcggccgccgcaccgcggtc
tggttgaccgaccataccaaagcgtcattccccaccgccccgtcgatcggatacgcatac
accctgtcgaaaacagtgccgaatacggtcgcgacgaccaccctcgcccccacgaacaca
atgacttcgtaccagctgttcgatggtctcggtttgccgatccaaacccaggcgccatcc
gccgccaacggcacgatcgtcaccgacaccatgcgcgactcggccggccgggtgcgcctt
acgaacagtgcgtactggaccaccgctgccgccccgtcggccaccctgttcgtcccgtcg
agcgagtcagcgatcccggacgagaccaccaccagttacgacggcgccggccggcccacc
gctaccaccgtgttctcactcggcgtgcaacgctcccagacgaccgtcgcctacaccggc
gccgatcgggtcgacaccaccccacccggaggtggcacccccaccacccagatcagcaac
agcctcggtcagcaaacccagctcactcagtacctcaacagcacccccactggcagtgcc
accgagaccaccagctacagctacaccgttcaagggaaaatggctggcatggtcgacccg
gcgggcaaccactggggatggtctttcgatgtcctcggccaccagacctcggctgtcgac
cccgacaccggcaccaccaccagcagcaacgacgatgccggcaacctgctgaccagcact
gacgcccgcggcgttaccctcgcctacacctacgacgccctgaaccggaaaaccagcgaa
cacaccggaacgacgaccgggccgatcctcgccgcctggacctacgacacggcggcgaaa
ggccagcccgacgcgtcgaccagttacgtcggctccacttcaaccacccctggggctgcg
tactcgtcgaccgtgaccggctacgatgccggataccggccaaccggagtcaccgtcagc
atccccgccggtgcccccgcgttcgccggcacctcctataccacagggttgcagtactac
cagaacggtgccctcggtgaggcctcctacccggctgaaggcggccttgctgccgaagac
gtcctcaccgcctacaactctgaagggcacgcctccggcctctccagcgccgacacaatc
gtcggtggtgtcttctacaccggcattaaccagatcgcccagatccaccgcaccggcaca
gccggcctcgacagcaactaccaatatgaccccgccacgggcgcaccaaccgacatcaaa
gacgccacaaccatcggcacaaccactgtgacccaagctgaccgggtttacagccacaac
cccgtcggcgacgtcaccgcaatcaaaaccactggcgccgctggcgcggacagtcaatgc
ttcagctacgactacctccacgacctcacccaagcctggacccccaactcgaacgactgc
acagccgcgcccaccgccacaacaatcggcggagccgccccatactggaccaactacacg
aacgacccagcaaccgggaaccgcaccaaggtcaccaacaaccccaccaccgggtcgggc
acccccaccaccgacagttacgcgtacccgacagccggcaccgcgaatccgcacgcagtg
cagtcggtgacccacaccgccggcaccggttcgactgacacctacgggtacgaccagatc
gggaacaccaccacccggcccgggcaaaccctcacctacgatgccaccggaaaactggcc
accgtcaccaccagtggggttacccagtcgaacatttacgacgccaacggaaccttgctg
atgcagacagacccgacgaacggcactaccttgttcctcggcgacacagaactacaggtc
gcagcaggttcctccaccccgtctgcggtccgcacctacagtgtaaatgggatcccggta
gccgaacggagtagcacagccggggtctccggttcccaattgtgtttccttggggtcgac
gcgaatcacaccgctgacctcgagattgacgcgagaagtggcgtcctctcgcggcggttc
atcgacccgtacggagtccctcggggcgcaacatccttgccttggtcgtcgacacacggc
tatctgaacgctccaacctcaagccaaagtgaccttacccatttgggatcaagggcttac
gaccctgtcaccggccggttcctctcggtcgatcctgtcctagctccgttcaatccgcag
caaaacaatggctaccgatatgcgggcgataacccaattacgatgagtgacccgagcggc
aattgcactcaaggggcgacggactcgctcgatttcaacagcaattgcgcgggtggctat
ggaacgaatgctcctggggcggggccggcttatcaggcgcctattccgatttcggacagc
gggcatgggggcaaaccgccaaagagtgatgaacccaaggattcgccctacgttgacggg
tgtgagtcgccgaacgttgctagttgtctccgtcccccaaagactgtgcagccaatccag
gtgtgcgttggaatgaatctttccagcgcctgccggcccgccctccccggtgagggggga
cccggccatgtcacctgtatttcggcgcaagcgagttcaatagttgtgggcgcgtcgggc
agcatctgcaactttcagctagggaacttcgatagcaccaacaccgcgggcggcgacttc
acgctcgggccgacgacaaagcttggcgcgagcattggcgtgggctttggctacacgaac
gcaacttcccgcgctgacatagattctttgacctggttggcaaccggggactatgcgacc
gggcttggagtaggaggcacctactcgtggggattcaacgccaaaggcgactatatttgg
atggcgcttgtctccggtgaggttggcgtcggaggtggcctttccgctggaggaggcacc
tcctgccgactgggagagacctgctaa
DBGET
integrated database retrieval system
