KEGG   Leisingera sp. M523: K3557_03230
Entry
K3557_03230       CDS       T10661                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
leim  Leisingera sp. M523
Brite
KEGG Orthology (KO) [BR:leim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:leim03400]
    K3557_03230
Enzymes [BR:leim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K3557_03230
    5.6.2.6  RNA 3'-5' helicase
     K3557_03230
DNA repair and recombination proteins [BR:leim03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    K3557_03230
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII DEXQc_Suv3 Cas3-like_C_2
Other DBs
NCBI-ProteinID: UWQ29588
LinkDB
Position
complement(682711..685128)
AA seq 805 aa
MSELPKVILGWFTARGWSIHPHQHSMLDCAGDPAALLIAPTGGGKTMAGFLPTLADLAES
PHDGLHTLYISPLKALAADIKRNLRAPVEDMGLPIRIDDRTGDTPSSRKRRQRADPPHIL
LTTPESLALLTSYEDAARTFKGLKRVVVDEIHALAESKRGDQLMLALARLQTLCPDLRRV
GLSATVDDPQAIASYLACHPAPCKIVQADPGPAPDIRMLETAEAPPWAGGGAAYAIAAVM
EQIQAHKTTLIFHNTRAQAEIFFRNLWLANDDALPIGIHHGSLDRGQRKRVEAAMVRGEL
RAIVCTGSLNLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECRAALDAVRAGDLDGEARGPGPRDVLCQHILIAACAGPFDADKLYTEVTSAGAYAALT
RAGFDACLDFCATGGYALKAYDQWQRLLQRPDGKWQLRDPRAAQRIRMNLGTIQDADLVK
VRLKRSRGGKPLGEIEEAFAATLTPGDTFLIGGRTVRYEGLREMTVEVTRTPGRKPKIAV
FSGTKFATSTQLSARILEMFSQDSWPDLPRHTAEWLELQRDVSDLPRAGSLLIESFPRDG
REHACIYGFAGRNAQQTLGLLLTKRMEELGLDPLGFVSTDYATLIWGLEPLTDPAPLFDV
TALREGLDGWLAGNAVMKRAFRGAATIAGLIERNTPGQRQNGRQATFSSDILYDTLRKYD
PGHLLMGITRDEALRGLVDFGRVEQMLERINGRITLRRLDRISPLAAPLLLEAGKVPVKG
AAQEKLLQREAEALMRLSGLDRLAQ
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgagcgaacttcctaaggtcattctaggctggtttaccgcccgcggctggtccatccac
ccgcaccagcactccatgctggactgtgccggggatccggcagccctgctgatcgccccc
accggcggcggcaagaccatggccggctttctgcccaccctcgccgatctggcagaaagc
cctcatgacggcctgcacaccctctatatttcaccgctcaaggcccttgctgcagacatc
aagcgcaacctgcgcgccccggtcgaggatatgggcctgcccatccgcattgacgaccgc
accggcgacacgccatcctcccgcaaacggcgccagcgcgccgatccgccgcatatcctg
ctgaccacaccggaaagcctggcgctgctcacctcctacgaggatgcggcccgcactttc
aaagggctgaagcgggtggtggtggacgagatccatgcgctggccgaaagcaaacgaggc
gaccagctgatgctggccctggcgcggctgcaaacgctctgccctgatctgcgccgggtg
ggcctgtcagcaaccgtggacgacccgcaggccattgccagctatctggcctgccacccg
gccccctgcaaaatcgtgcaggcagaccccggccccgccccggacatccggatgctggaa
accgcagaagcgccaccctgggccggcggaggcgcggcctatgccatcgcggcggtgatg
gaacagatccaggcgcataaaaccacgctgatatttcacaacacccgcgcccaggccgag
attttctttcgcaatctctggctcgccaatgacgatgcgctgccgatcgggatccatcac
ggctccctcgaccggggccagcgcaaacgggtcgaagccgccatggtccgcggcgagctg
cgcgccattgtctgcaccggttcactgaacctcggcattgactggggcgatgtggacctg
gtgatccagatcggcgcaccgaagaacgtgaaacgcctggtccagcgcatcggccgcgcc
aaccaccgctacaacgcgccgtccaaggcgcttctggtgcccgccaaccggtttgaagtg
gtggaatgccgtgccgcgctggacgctgtccgtgcaggcgatctggatggcgaggcgcgc
ggccccggtccccgcgacgttctttgccagcacatcctgattgcagcctgcgccgggccg
tttgatgcagataaactctacaccgaagtaaccagcgccggcgcctatgccgccctcacc
cgcgccggtttcgatgcctgtctggatttctgtgccaccggcggctacgcgctgaaagct
tacgaccagtggcagcgcctgttgcaacgcccggacggcaaatggcagctgcgcgatccg
cgcgccgcccaacgcatccgcatgaacctgggcaccatccaggacgccgacctcgtcaag
gtgcgcctgaagcgcagccgcggcggcaagcccctgggcgagatcgaggaagcctttgcc
gccaccctcacccccggcgacaccttcctgatcggcggccggaccgtgcgatacgagggg
ttgcgcgaaatgaccgtcgaggtcacccgcacccccggcaggaaaccgaagatcgcagtg
ttctccggcaccaaattcgccacctccactcagctcagcgcgcgcatcctggagatgttc
agtcaggacagctggccagatctgccccgccacaccgccgaatggctggaactgcagcgc
gacgtctcggaccttccccgcgccgggtcgctgctgatcgaaagcttcccccgcgacggg
cgcgagcatgcctgcatttacggctttgccggccgtaacgcacagcaaacgctgggactg
cttctaaccaagcggatggaggagcttggccttgatccgcttggctttgtctcgaccgac
tacgccaccttgatctgggggctggagccgctgaccgacccggccccgctgttcgatgtc
actgccctgcgcgaggggctggacggctggctggccggcaacgcagtaatgaaacgcgcc
ttccgcggcgcggcgaccattgccgggctgattgaacgcaacacacccgggcaacgccag
aacgggcgccaagcaacattctcctccgacatcctctatgacacgctcaggaaatacgac
ccgggccacctgctgatgggcatcacccgcgacgaagccctgcgcgggctggtggatttt
ggccgcgttgagcagatgctggaacggatcaatggccggatcaccctgcggcggctggac
cggatctcaccgcttgcagcgccgcttttgctggaggctggcaaggttccggtcaaaggc
gcagcgcaggaaaagctgctgcaacgcgaggccgaagcgctgatgcggctatccggactg
gaccggctggcgcaatag

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