Leisingera sp. M523: K3557_10225
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Entry
K3557_10225 CDS
T10661
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
leim Leisingera sp. M523
Brite
KEGG Orthology (KO) [BR:
leim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leim03000
]
K3557_10225
Transcription factors [BR:
leim03000
]
Prokaryotic type
Helix-turn-helix
Other families
K3557_10225
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_29
RlaP
HTH_23
Sigma54_activat
HTH_17
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UWQ27215
LinkDB
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Position
complement(2087948..2089678)
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AA seq
576 aa
AA seq
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MSAFLDRTSVDKLIRSSRERSQSKHSLTSSTRNPILRLQADEIIHRNERFLDQAGGAAAE
VDKSALLPSRSRYCLLITDADGIVIESYAPEGVEAEFQRSGLVRGAVWDERVAGTNGIAM
AMQSGRVLTVRGGEHFYDCFHQLSCSSAPLTDAQNNLIGTITLVGSLHRRPEEHALCEQV
VRRASRQFQTRLFRNFHADKLTGRVLSQDLEQNRIFETLVACDEDGVIISHLPLWRDAAR
PTEHQGLAGRYISDLKNLKISLRGPAVVPPKRKVLHPDKPRLPARIGKDATLGRLIAEGG
GLPVLTERARKLVAHRVPLLICGAPGTGAGRFARALLEDQNLDTPMTLTLDAAHSGTETD
LAEALKSLDFLSDYPVCDIAPTLILKNVETLSAEAQAVLERYLDSSRADSGSKAHPPVVL
FTAGKPWLQLESDEGIPRNLLYLLAQSVVELPPVTERDCETVLANVIAESFDTAIEIAES
ALDVLTGYHWPGNRREMMAVLREAVICGNGRRINVTDLPARLLAPQEESSKALTRASLRD
ALDSTNWNVTKAARLLGKSRATLNRWIASEGLQRPE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttttttggacaggacatccgtggacaagctgatccggtcctcacgggagcgg
agccaatccaagcacagcctgacgtcaagcaccagaaacccgatcctgcggctgcaggcc
gacgaaatcatccaccgcaacgagaggtttctggatcaagctggcggggcggcggcagag
gtagacaaatccgctctgctgcccagccgctctaggtattgcttgctgatcactgatgca
gacggaattgtaattgaatcctatgcgcctgagggggtggaggcggaatttcaaagaagc
ggccttgtcagaggggcggtatgggatgagcgtgttgcaggcaccaatgggatcgcgatg
gcgatgcagtccggccgggtcctgacggtacgcggaggcgagcatttttacgattgcttt
caccagctcagctgcagctcagcgccgctgaccgatgcccagaacaacctgatcggaaca
ataacgctggtgggatctctgcatcggcgtcccgaggaacacgccttgtgcgagcaggtc
gtgcggcgagcctcccgtcagtttcaaacacgcctgtttcgcaattttcacgcggacaag
ctcaccgggcgcgtgttgtcgcaggacttggagcagaaccgcatctttgaaaccctggtg
gcctgcgatgaagacggtgtcatcatctcgcacctgccgctctggcgcgatgccgcacgg
ccgaccgaacaccagggtcttgcagggcgttacatttccgatttgaaaaaccttaaaatc
agcctgcgcgggccggctgtggttccgcccaagcgcaaggtgctgcaccccgataagccg
cgccttcctgcgcggatcggcaaggacgccacactggggcggctgattgcggagggcggc
ggcttgccggtcttgacggagcgggcccgcaaactggtggcgcaccgggtgccattgctg
atttgcggcgcgcctggcacaggggccggacggtttgcccgggcacttttggaagaccag
aacctcgacactccaatgacgctcaccctcgatgcggcccatagcggcaccgaaaccgat
ctcgcagaggcactgaaaagcctggacttcctcagcgattacccggtttgcgacatagct
ccgacattgatcctgaagaatgtcgaaactctgtcggcagaagcgcaagcagtcctcgaa
cgctatcttgacagcagccgggcagacagcggctcaaaggcgcatcctccggtggtgctg
ttcaccgcgggcaaaccgtggctgcagcttgagagtgacgagggcattcccaggaacctc
ttgtatcttctggcacagtcagttgttgaactgccgccggttaccgagcgggattgcgag
acggtgctggccaatgtcatcgcggagagttttgatactgccatcgagatcgctgaaagc
gccctggatgtgctgaccggttaccattggccgggcaacaggcgggaaatgatggctgtt
ctgcgcgaggcggtgatttgcggcaacggcaggcggatcaacgtgaccgacctgccggca
cgcttgctggcgccgcaggaggaaagttccaaagcgctgacgcgggcgtcgctgcgggac
gcgttggacagcaccaactggaacgtgacaaaggccgcgcgcctgctgggcaagagccgc
gcaacgctcaaccgctggattgcctcggaagggctgcagcgtccggaatag
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