Leisingera sp. M523: K3557_11895
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Entry
K3557_11895 CDS
T10661
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leim Leisingera sp. M523
Pathway
leim03420
Nucleotide excision repair
leim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3557_11895
03430 Mismatch repair
K3557_11895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leim03400
]
K3557_11895
Enzymes [BR:
leim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3557_11895
DNA repair and recombination proteins [BR:
leim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3557_11895
MMR (mismatch excision repair)
Other MMR factors
K3557_11895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UWQ27517
LinkDB
All DBs
Position
complement(2437382..2439763)
Genome browser
AA seq
793 aa
AA seq
DB search
MSSFDEMDAFEGASLSARAMQARPMPYLDSLNPAQREAVECLDGPVLMLAGAGTGKTKAL
TTRIVHLLSTGRVRPNEILSVTFTNKAAREMKERVSGMLGQAVEGMPWLGTFHSVCVKLL
RRHAELAGLKSNFTILDTDDQIRLLKQLIKAEGIDDKRWPARMLANIIDDWKNRALTPDK
VPAGDASAYNNRGTEFYAQYQTRLRELNAVDFGDLLLHMVTIFQNHPDVLEQYQRWFRYI
MVDEYQDTNVAQYLWLRLLAGKHKNVCCVGDDDQSIYGWRGAEVGNILRFEKDFPGAIVV
RLEQNYRSTGHILAAASNVIRGNQGRLGKELWTAAGDGEKLRLIGHWDGEEEARWIGEEI
EAMQRGTRGQSPIGLNSMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRVVVSPDDDLAFERIVNTPKRGLGDKAQQTIQGLARENGVSLVEGARLAVEGGHIKG
KGGGALRQLVEGIIRWGRMAGDADITHMELAEIILDESGYTTMWQNDKNPDSPGRLENLK
ELVKALENFENLQGFLEHVSLVMDNDKQDADEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGQKGLEEERRLAYVGITRAEQICTISFAGNRRVFGQWQSQLPSRFIDELPE
EHVEVLTPPGLYGGGYGAAAPGGTMGGSMGGGQVRSTIEEKMAQADGYNSPGWKRMQARA
GERGMSQPKESKHQVIDLTATSSFTLGERVFHQKFGYGSITGIEGDKLEVDFEKAGTKKV
VARFVSATDDVPF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgaaatggacgcctttgagggcgcatcattgtcggcccgtgccatg
caggcgcggccgatgccctatctggacagccttaacccggcgcagcgcgaggcggtggag
tgcctggatggccccgtgctgatgctggcgggggccggcaccggcaaaaccaaggcgctg
acgacgcggattgtgcatcttctcagcaccggtcgggtgcgcccgaacgaaatcctgtcg
gtgactttcaccaacaaggccgcgcgcgagatgaaggaacgggtgagcggcatgctgggt
caggcggtcgaaggcatgccctggcttggcaccttccattcggtctgcgtgaaactgctg
cgccgccatgccgaactggcgggactgaagtcgaatttcaccattctcgataccgatgac
cagatccggctgctgaaacagctgatcaaggcggaaggcatcgacgacaagcgctggccc
gcgcggatgctggcaaatatcatcgacgactggaaaaaccgggcgctgacaccggacaaa
gtgccggccggcgatgccagcgcctataacaaccgcggcaccgaattttatgcccagtac
cagacccgcctgcgcgagctgaacgcggtcgatttcggcgacctgctgctgcacatggtg
acgatcttccagaaccacccggacgtgctggagcagtaccagcgctggttccgctacatc
atggtggacgaataccaggataccaacgtcgcccagtacctgtggctgcggctgctggcg
ggcaagcacaagaacgtctgctgcgttggtgacgatgaccagtcgatttatggctggcgc
ggcgctgaggtcggcaacatcctgcggtttgaaaaggattttcccggcgccattgtggtg
cggctggaacagaactaccgctccaccgggcatatcctggccgccgcttcaaacgtgatc
cgcggcaatcagggccgcctgggcaaggagctgtggacggccgccggcgacggcgaaaag
ctccgcctgatcggccattgggacggcgaggaagaagcccgctggatcggtgaagaaatc
gaggcaatgcagcgcggcacccgcggccagtcgcccatcggtctgaacagcatggccatt
ctggtgcgcgcctcgcaccagatgcgcgcgttcgaggaccggtttctgaccatcggcctg
ccataccgtgtcatcggcggcccgcgtttctatgaacggctcgagattcgcgatgcgatg
gcttatttccgcgtggtggtctcacccgacgacgacctcgcgtttgaacgcatcgtcaat
acgccgaaacgcggcctgggcgacaaggcgcagcagaccattcaggggcttgcccgtgag
aacggtgtgtccctggtcgaaggggcgcggctggcggttgaaggcggtcatatcaagggc
aaaggcggcggcgccctgcgccagctggttgagggtatcatccgctggggccgcatggcc
ggcgacgccgacatcacccatatggagctggctgaaatcatcctggatgagtcgggctac
acgaccatgtggcagaacgacaagaacccggattcacccggccgtctggaaaacctcaag
gaactggtgaaggcgctggagaacttcgagaacctgcaaggcttcctcgaacacgtcagc
ctggtgatggacaatgataagcaggacgcggacgagaaggtctcgatcatgaccctgcac
gccgccaagggcctggagttccccgccgtgttcctgccgggctgggaggacgggctgttc
ccctcgcagcgctcaatggatgaaagcggccagaaggggctcgaggaagaacgcaggctg
gcctacgtcggcatcacacgggccgagcagatctgcaccatctcctttgccggcaaccgc
cgggtgttcggtcaatggcaatcgcagctgccctcgcgcttcattgacgagctgccagag
gaacatgtcgaggtgctgaccccgccgggcctttacggcggcggctatggtgcggcagca
ccgggtggtactatgggcgggtccatgggcggggggcaggtgcgctccactatcgaagag
aaaatggcccaggccgatggctacaactcccccggctggaagcggatgcaagcgcgggca
ggcgagcgcgggatgtcgcagcccaaggagagcaagcatcaggtgatcgacctcaccgct
acgtccagcttcactctgggcgaacgcgtgttccaccagaaattcggctacggctcgatt
accggtatcgagggggacaagctggaagtggacttcgagaaggccggcaccaagaaagtt
gttgcccggtttgtttccgctaccgacgacgtgccgttctga
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