Leisingera sp. M523: K3557_16435
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Entry
K3557_16435 CDS
T10661
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leim Leisingera sp. M523
Pathway
leim03420
Nucleotide excision repair
leim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3557_16435
03430 Mismatch repair
K3557_16435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leim03400
]
K3557_16435
Enzymes [BR:
leim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3557_16435
DNA repair and recombination proteins [BR:
leim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3557_16435
MMR (mismatch excision repair)
Other MMR factors
K3557_16435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UWQ28332
LinkDB
All DBs
Position
complement(3357382..3359331)
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AA seq
649 aa
AA seq
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MTDVTDANRDATADETIRACLSLTAPRSFFLFAGAGSGKTRSLKDALERLDTQTLTTLRK
HSRKIAVITYTNAAADEITRRVKADPVFQVQTIHSFAWSLIEGRTADIRGWLEDRLPTEI
AKDQATYEKSRAGSKVHATSFKKVASKTKRLERLAEIRAFTYAPQGDNFGRDALQHAEVI
ALAAHFLTESETFQNIVLARYPFILIDESQDTMKPLMEALLTFEARHRGRIALGLLGDTM
QRIYTDGLRDLDQRVGDFAQPAKQMNHRSRARIVDLANAIRRDDDGRQQRAREDKPGGTV
RVFLAPSEGTDRAAFEAWTRAEMARITEDRAWQDAEAIKTLTIERHMAAARLGFSELFEP
LSKPDKLKDGFRDGTLPAMRLFTYRVLPLVTAQRNGDAFAAMAVLRDGSPLVDKRGIRAG
HADQASGLDAARAGVAALMTLFKDERDPSCAEVLAVVAEHRLFPIPDQFRPCLPDNSPVA
QDMADILAELGPTFDEQGLTTPEDTPPIATTITEAWTQALAAPFSQVARYLAYVEDRSPY
GTHQGVKGLEFPRVMVVADDAHTRFKGLASYETLFEVKPLGPTAQKQADKGEETTIERTR
RLLYVTCTRAEESLALVLYSVAPDTIRHFLIFNGWMSEDEVVMAAPGGT
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacgtgacagacgccaaccgcgacgccaccgccgatgagacgatccgcgcctgc
ctgtccctcaccgcgccgcgcagcttctttctttttgccggggcgggatcgggcaagacg
cgctctctcaaggacgcattggagcggttggacacacagaccctgaccaccttgcgcaaa
cacagccgtaagatcgctgtgatcacctataccaacgccgccgcagatgagatcacgcgc
cgcgtcaaggccgatccggtgtttcaagtgcagaccatccacagcttcgcttggtcgctc
atcgaggggcgaacggcggatatccggggctggctagaggaccgtttgccgacggagatt
gccaaagatcaggcaacctatgagaagagccgggcgggcagcaaagtccatgcaactagt
ttcaagaaagttgcctccaaaacaaagcggctggagcgcctggccgagatccgcgccttc
acctacgcgccccagggggacaatttcggccgcgacgccctgcagcatgccgaggtcatt
gcgctcgccgcgcatttcctgactgaaagcgagacattccagaacatcgttctggcgcgc
tacccgttcatcttgatcgacgagagtcaggacacgatgaaaccattgatggaggcgctt
ttgaccttcgaggcgcgccatcgcggccgcatcgccctagggttgctcggggacacgatg
cagcgcatttacactgatggtttgcgcgatctcgaccaaagggtgggggatttcgcgcaa
cccgccaaacagatgaaccaccgcagccgcgcgcggatcgtggacttggcgaatgcgatc
cggcgcgacgatgatggccgccagcagcgtgcgcgcgaagacaaaccgggtggcaccgtg
cgcgtctttcttgcgccaagcgagggcacggatcgcgcggcatttgaagcttggacccgg
gcggaaatggcccgcatcaccgaagaccgcgcatggcaggacgcggaggcgatcaagacc
ctgacgatcgagcgtcacatggctgccgcacgtcttggctttagtgagctgtttgagccc
ctgagcaaacccgacaagctcaaggacgggtttcgcgatggcaccttgcccgcgatgcgg
cttttcacctaccgggtcttgcctttggtgacggcacaaaggaatggggatgcctttgcc
gctatggcggtgctgcgcgacggctcaccgctggtcgataagagaggtatccgggcgggg
cacgcggaccaagcctctggccttgacgcggcgcgggcgggtgtcgcggcgctgatgacg
ctatttaaggacgaacgggatccgagttgtgccgaagtgttagcggtggtggccgagcac
cggctgttcccgatcccagatcagtttcggccctgtttgcctgacaacagtcccgtggcc
caggacatggccgacattcttgccgagcttggtcccacttttgacgagcagggcctgact
acgcccgaggacacaccacccatagcaaccaccatcaccgaggcctggacgcaggcactt
gccgccccgttttcccaagtggcgcgctacctcgcctatgtcgaagaccgcagcccttat
ggcacccaccaaggagtcaaggggctcgaattcccccgggttatggtggtcgccgacgac
gcccacacgcgcttcaaaggccttgcctcctacgagacgctgttcgaggtgaagcccctg
ggcccaaccgcgcagaaacaggcggacaagggtgaggaaaccacgatcgagcgtacacgc
cgtttgctgtacgtcacctgcacgcgggcggaagagagcctcgcgcttgtactctattcc
gtggcccccgatacaatccgccactttttgattttcaacggatggatgtccgaggatgag
gtcgtgatggctgcgcccggcgggacctag
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