KEGG   Leishmania sp. Namibia: 94183860
Entry
94183860          CDS       T10410                                 
Symbol
JIQ42_00084
Name
(RefSeq) hypothetical protein
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
lein  Leishmania sp. Namibia
Pathway
lein03022  Basal transcription factors
lein03420  Nucleotide excision repair
Brite
Transcription machinery [BR:lein03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     94183860 (JIQ42_00084)
DNA repair and recombination proteins [BR:lein03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     94183860 (JIQ42_00084)
SSDB
Other DBs
NCBI-GeneID: 94183860
NCBI-ProteinID: XP_067704454
LinkDB
Position
36:328192..329880
AA seq 562 aa
MSSSSSVLEKPFIEVVCSYPAREKLCAQCPALLLLVYEHVVAELQAGRRVADVYRGTSRQ
DHLSELLAVRSLSELFERLYSSAPSSSCDDGTASAQFWRQVRITLEAAWAPPHDTKVRAL
LTLVHGQPRFCFCGPRDAAVPGEGSPLHPVSLERALATSKRFLRTATTCALDGSTDALAD
RQPELRAVLQLARLVPQTSSTTAAAKKEVTPEGLCFCMVSLQHRWWVLVNAALERVVLLT
RAAVDVSGDPSGSRKVTKPILWQLLAVLSVLDTAHYIFAFPERQQDLAAHHLLARLSEVG
LVYPILSDHRKCFVLSPDFLHAIHWQASAPLSLTFHHHLLHSGNGSSRIGVGDIRREDTD
TIITETNFRLYAYTNDPDLLNILNLFAVLEEVVNENLHCYRVTRDSFAVAMRKGITAMQV
LRFLSLRAHPSMLRRYGERERSGDTASLPSAVRASSSLSFSAPPRHATAPGTHGSSTSVD
AVVTLVVPQSFCDQMRMWESECRRVVFEHHVSLLRNMSPEQQKAVTAYLTDAGEVDGILH
AERGYMVIREEIFERLIAPLLE
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtcctccagctcgtcggttctggaaaagccgtttatagaagtcgtttgcagctatcca
gcccgagagaagctgtgcgcccaatgtcctgcgctgctgctcctcgtctatgagcacgtc
gtagcggagctgcaggcggggcgacgcgtcgcggacgtgtaccgcggcacctcacgacag
gaccacctgagtgaattgctcgctgtgcgctcgttgtcggagctgttcgagcgcctttac
tcgtcggccccgtctagcagctgcgatgacggcactgcgagcgcgcagttctggaggcag
gtgcggataaccttggaggcagcatgggcgccgccgcacgacaccaaggtgcgtgctctt
ctcacgctggtgcacgggcaaccgcggttctgtttttgcgggccgcgcgacgccgcggtg
ccgggcgagggctctccactgcaccccgtctccctggagcgggccttggcaacgagcaag
cgctttctccgcaccgcgacgacctgtgctctggacgggtcaacggatgccttggccgac
cggcaaccggagctgcgcgcggtgctgcagctggcacgccttgttccgcaaacttcgtcg
acgacagcggcagctaagaaagaggtcacgccggagggactttgcttctgcatggtgtct
ttgcagcatcggtggtgggtgcttgtgaacgcggcgctggagcgcgttgtgctgcttacg
cgcgctgccgtggatgtcagcggtgaccccagcggcagccgaaaggtcacgaaaccgatt
ctgtggcagctgctggcggtcttgtctgtgctcgacacggctcactacatcttcgcgttc
ccagagaggcagcaggatctggcggctcaccatcttctcgcccggctctccgaggtcggg
ctggtttaccccattctcagcgaccatcgaaagtgctttgtgctgagtcctgactttcta
cacgccattcactggcaagcgagtgcaccgctgtccctcaccttccaccaccatctcctg
cacagcggtaacggctccagcaggatcggcgtcggcgacatacgtcgcgaggacacggac
accatcatcaccgaaacaaacttccgtctgtacgcgtacaccaacgaccccgacctgctt
aacattttgaacctgttcgcggtcctggaggaagttgttaacgagaacctccactgctac
cgcgtgacgcgcgacagctttgccgtcgctatgcgcaagggcatcactgccatgcaagtg
ctacgctttctttctctgcgagcgcaccccagcatgctgcgccggtacggggagcgggag
aggagcggcgacacagcgtcgctgccgtccgctgtccgcgcctcctcgtcgttgtccttt
tcagcgccgcctcgtcacgcgaccgcgcctggcacgcatgggagttccacgtccgttgat
gctgtcgtgacgctggtggttccgcagtctttctgcgaccaaatgcgcatgtgggaaagc
gagtgtcgtcgtgtcgtgtttgagcaccacgtctctctactacgcaacatgtcacctgag
cagcagaaggcggtgactgcgtatctcactgatgcgggggaggtcgacggcattctgcac
gccgagcgcggctacatggtgattcgagaagagattttcgagcgccttattgcaccactt
ctggaatga

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