Leishmania sp. Namibia: 94183962
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Entry
94183962 CDS
T10410
Symbol
JIQ42_00187
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lein Leishmania sp. Namibia
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lein03041
]
94183962 (JIQ42_00187)
03009 Ribosome biogenesis [BR:
lein03009
]
94183962 (JIQ42_00187)
Enzymes [BR:
lein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94183962 (JIQ42_00187)
Spliceosome [BR:
lein03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
94183962 (JIQ42_00187)
Ribosome biogenesis [BR:
lein03009
]
Eukaryotic type
90S particles
Helicases
94183962 (JIQ42_00187)
Pre-60S particles
94183962 (JIQ42_00187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF4129
Motif
Other DBs
NCBI-GeneID:
94183962
NCBI-ProteinID:
XP_067704556
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All DBs
Position
36:complement(<755215..>757194)
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AA seq
659 aa
AA seq
DB search
MSARAPAVSSLGGRSESVATADAEQPSTKRRRIRHHRSKTAREAAAKSADREPLDEVAEA
VEDDDEVSAVDESRASASKMASTKRPEKRRREDSSDDGDEVGADVVASGAHRHHPQKLGA
AKGGEASCPSTSASPPASSSPAASTAASVTQHSKESAKSIPAVTDYKLLQLNPHIVSALE
QEFQFKELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAA
IIIGPTRELCLQIEGVLLRLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRL
LDHLKLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKYRQTFLFSATQTTRVE
QLARISFHKAPIFISMKSKKDKATVDTLEQGYVVCASEQRLLVLYHFVKKNSKKKVIVFF
SSRNSVSFHCELFNYIDVPCIAFHGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIP
EVDWIVQFDPPDDPVKYVHRVGRTARAGRGGSALMFLLPQEELFLKYLYDDAKVNVNEYT
FDVTKMKANVQEQLEQLVGSNYYLRTSARQAYEGYLLSYSSCQLKNVFNIQNLDLAAVAR
GFALSEPPPIKMDLSQSAAHMSKKSRHEFRAMRHAKDAKRRNVNEKSMNKRHQNISGEW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaagggcacctgcggtgtcctcgttgggaggccgcagcgaaagcgtcgctact
gcggacgccgagcagccatcaacgaagcgccgccgcattcgccaccaccgaagcaagacc
gcacgagaagctgccgcaaaaagcgccgacagagagccgctcgacgaggtcgccgaggcg
gtggaagatgacgatgaggtgagcgcggtggatgagtctcgggcctcggcgtcgaagatg
gcgtcgaccaagcgtccggagaagcggcgccgtgaagacagcagcgacgacggcgacgag
gtgggcgcggatgttgtggcgtcgggtgcgcaccggcatcacccccaaaagctcggcgca
gcgaagggaggcgaggcatcgtgcccctccacctctgcgtcccctcctgcgtcatcgtcg
ccggctgcctccacagccgcgagcgtgacacagcacagcaaggagtcggccaagtccatt
cctgccgtcacggactacaagctactgcagttgaacccccacattgtctctgcactggag
caagagttccagttcaaggagctgacgccgattcagtctcgctgcattcctgctgcactg
caaggacgcgatctcctcgccgaggcgaagaccggcgcaggtaagacgttggcctttttg
atcccgattgtcgagatcgtctgccgctccggcttccgccccagcaacggcacggctgcc
atcatcatcggccctacccgcgagctctgcctgcagatcgagggcgtgctgctgaggctg
ttgaaacacttcaacggctctctgacgttcttgtgctgcattggtggccaaagccgcaac
caggaaggctttaagctcgccaacggcgtcatgatcgtggtggcctccccgggtcgcctt
ctggatcacttgaagttgacgacagattggcacacgaagaacctactgctgctcgctgtt
gacgaggcagatcgcgtgctcgacaacggctttgaggaggacatgcgcgaaattgtcgcc
ctgctgcccaagtaccgccagacgttcttgttttcggcgacgcagacaacgcgtgtcgag
cagctcgcgcgcatctcatttcacaaagcgccgatcttcatctcgatgaagagcaaaaag
gacaaggccactgtggacacgctggagcagggctacgtcgtgtgcgcgagcgagcagcgc
ctactcgtgctctaccactttgtcaaaaagaactcgaagaaaaaagttatcgtctttttc
agcagccgcaacagtgttagcttccattgtgaactattcaactacatcgacgtgccgtgc
atcgccttccacggcaaacaaaagcagcaccagcgctctgcgacgtatatgcagttttgc
aatgcgccgagtggcgtactctttacgaccgatgtcgcggctcgtggtctcgacattccc
gaggtggattggattgtccagttcgaccccccggatgatccggtgaagtacgtgcaccgt
gtcgggcgaaccgcacgcgctggccgcggtggaagcgccctcatgtttcttctgccgcag
gaggagctgttcctcaagtacctctacgatgacgccaaggtgaatgtgaacgagtacacg
tttgatgtgacaaaaatgaaagccaacgtgcaagagcagctggagcagttggtgggctcg
aattactacctgcgcacgtcggcgcggcaggcgtacgagggctacctgttaagctatagc
agctgccagctgaagaacgtattcaacatccaaaacctggaccttgctgcagtggcgcgc
ggatttgcgctgagtgagccgccacccatcaagatggacctctctcaatccgctgctcac
atgagcaagaagtcgcgacacgagtttcgcgccatgcgccacgccaaggacgctaagcga
cgcaacgtgaacgaaaagtcgatgaacaagcggcatcagaacatcagcggcgagtggtga
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