KEGG   Leishmania sp. Namibia: 94184489
Entry
94184489          CDS       T10410                                 
Symbol
JIQ42_00729
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
lein  Leishmania sp. Namibia
Pathway
lein03030  DNA replication
lein03410  Base excision repair
lein03420  Nucleotide excision repair
lein03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lein00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    94184489 (JIQ42_00729)
   03410 Base excision repair
    94184489 (JIQ42_00729)
   03420 Nucleotide excision repair
    94184489 (JIQ42_00729)
   03430 Mismatch repair
    94184489 (JIQ42_00729)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lein03032]
    94184489 (JIQ42_00729)
   03036 Chromosome and associated proteins [BR:lein03036]
    94184489 (JIQ42_00729)
   03400 DNA repair and recombination proteins [BR:lein03400]
    94184489 (JIQ42_00729)
DNA replication proteins [BR:lein03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    94184489 (JIQ42_00729)
  DNA Replication Termination Factors
   ELG1-RFC complex
    94184489 (JIQ42_00729)
Chromosome and associated proteins [BR:lein03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    94184489 (JIQ42_00729)
DNA repair and recombination proteins [BR:lein03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     94184489 (JIQ42_00729)
  Check point factors
   HRAD17(Rad24)-RFC complex
    94184489 (JIQ42_00729)
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Mg_chelatase RuvB_N AAA_24 AAA_2 AAA_5 BBIP10 Rep_fac_C AAA_22 Fumble
Other DBs
NCBI-GeneID: 94184489
NCBI-ProteinID: XP_067705083
LinkDB
Position
36:complement(<2617156..>2618211)
AA seq 351 aa
MLWVDRYRPKTLQEVELYPELKEVLTRLSKAQDLPHLLFYGPSGSGKKTRAMTMLHEIYG
PSIYSVRLEHKSVQVTDSKVVDIATLSSPHHIDINPSDAGNYDRSIVMQMIREIAQTVPL
HTTANNPKRVPYKVVMLNEVDKMSRSAQHALRRTMEKYMSTCRLFLICNSTSRLIPPLRS
RCLGIRIAAHSKDNLKLAVQHVCEGEGRSLPSAAFLHSLALRSDGNLRRGLLMLEASAMA
RVDWSGSGDAIPQADWKLFLDEISHDIVAEQTPKRLHEIRLKFYDLLAQCISGETILKTL
VDSLLTAVAPDLQRPLIELAAKYDHNMKLGTKPILHLEAFVAGVMKLIKQQ
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgctgtgggtggaccgatatcgaccgaaaaccctccaggaagtggagctgtacccggag
ctgaaggaggttctgactcgcctttccaaagcgcaggaccttccgcacctcttgttttac
ggcccctctggcagcggcaaaaagacacgcgccatgaccatgctacatgagatctacggc
ccaagcatttactcggtgcgtctggagcacaagagcgtgcaggtaacggatagcaaggtg
gtcgacatcgccaccctcagctcaccccatcacatcgacatcaatccgtccgacgctggc
aactacgatcgctcgatcgttatgcagatgatccgcgagatagcgcagacggtaccgttg
cacaccacagctaacaatccaaagagggtgccatacaaggtggtgatgctgaacgaggtg
gataagatgagccgcagtgcccaacacgcgcttcgacgaacaatggagaagtacatgagc
acctgccgtctctttcttatctgcaactcgacctcgcgcctgatcccgcctttgcggtcc
cgctgcctcggcatccgcattgccgcgcattcgaaggacaacctgaagctggccgtgcag
cacgtgtgcgagggtgagggtcgatctcttccctcagcagcgttcttgcactcactagcg
ctgcgctccgacggcaacctgcgccgcgggctactgatgctggaagcgtccgccatggcg
agggtggattggagcggcagcggcgatgccataccgcaggcggactggaagttgtttctg
gatgaaatttcgcacgacatcgtggcggagcagacgccaaagcggctgcacgagattcgg
ctaaagttctacgatctcctagcccagtgcatctctggcgagaccatcctaaagacgttg
gtggacagcttgctgacggctgtggcgccagaccttcagcgtcctctgatcgagctcgcc
gccaagtacgaccacaacatgaagctcggaacaaagcccattctgcatctcgaggcgttt
gtggccggtgtaatgaagctcatcaagcagcagtag

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