Leishmania sp. Namibia: 94184563
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Entry
94184563 CDS
T10410
Symbol
JIQ42_00803
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lein Leishmania sp. Namibia
Pathway
lein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
94184563 (JIQ42_00803)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lein03019
]
94184563 (JIQ42_00803)
03036 Chromosome and associated proteins [BR:
lein03036
]
94184563 (JIQ42_00803)
Enzymes [BR:
lein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94184563 (JIQ42_00803)
Messenger RNA biogenesis [BR:
lein03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
94184563 (JIQ42_00803)
mRNA degradation factors
5'-3' decay
Decapping complex
94184563 (JIQ42_00803)
Chromosome and associated proteins [BR:
lein03036
]
Eukaryotic type
Gene silencing
piRNA pathway
94184563 (JIQ42_00803)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
94184563
NCBI-ProteinID:
XP_067705157
LinkDB
All DBs
Position
35:<126083..>127300
Genome browser
AA seq
405 aa
AA seq
DB search
MSDSNWKAQLNAPQKSTRKKTEDVESRRNVNFEEYALRRELQMGIFEKGFEKPSPVQEEA
IPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRESYVQALLMVPTRELALQTAQVTKE
LGKHISGLEVMVTTGGTTLRDDILRLTSKVHILVATPGRVLDLASKKAVDLSHCHILVLD
EADKLLSQEFMEIIDDLYTYLPSQLQSMLFSATFPVTVKTFAERHLHNPYEINLMDELTL
KGVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHA
RMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSG
RFGHLGVAINFVTYDDRYNVYRIEQELDTEIKPIPADIDPELYAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccaactggaaggctcagctgaacgcgccccagaagagcacgcggaaaaag
acggaggatgtggagtctcgccgtaacgtcaacttcgaggagtacgccctgcgccgtgag
ctgcagatgggcatcttcgagaagggcttcgagaagccgagccctgtgcaggaagaagcc
atacccgtcgcccttcagggcaaggacgtgctcgcccgtgccaagaacggtaccggcaag
acagcctctttcgtgatcccggtgcttgagaaggtcgatacccgtgagtcgtatgtgcag
gcgctcctgatggtgcctacgcgtgagctggccctgcagaccgcgcaggttacgaaggag
ctgggcaagcatatctccggcctggaggtgatggtgaccaccggcggtacaacgctgcgc
gatgatattcttcgcctgacgagcaaggtgcacattctggtcgcgaccccgggtcgtgtg
cttgatctggcgagcaagaaggcagttgacctttcccactgccatatcctggtgctggac
gaggccgacaagctgctgtcccaggagttcatggagatcatcgacgacctgtacacgtac
ctcccatcgcagctgcagtccatgctcttttctgccacgttcccggtgacggtgaagacg
ttcgcggagcgccacctacacaacccctacgagatcaacctgatggacgagctgaccttg
aagggtgtgacgcagtactatgcctttgtcgaggaacgccagaagatccactgcctcaac
acgctcttcaacaagctgcaaatcaatcagtccatcatcttctgtaatagcgtcaaccgt
gtggagctgctcgcgaagaagattacgcagctcggctatagctgctactacatccacgcc
cgcatgcagcagcagcaccgtaatcgcgtcttccacgacttccgcgagggccactgccgc
aacctcgtctgctctgacctcattacccgcggtatcgacattcaggcagtgaacgtggtc
atcaactttgacttccccaagtacgccgaaacgtatctgcaccgcatcggccgctccggt
cgcttcggccaccttggcgttgccatcaacttcgtgacatacgatgaccgctataatgtc
taccgcattgagcaggagttggacacagagatcaagccgatcccggctgatatcgaccct
gagttgtacgcggcataa
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