Leishmania sp. Namibia: 94184989
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Entry
94184989 CDS
T10410
Symbol
JIQ42_01243
Name
(RefSeq) hypothetical protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
lein Leishmania sp. Namibia
Pathway
lein03030
DNA replication
lein03410
Base excision repair
lein03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94184989 (JIQ42_01243)
03410 Base excision repair
94184989 (JIQ42_01243)
03420 Nucleotide excision repair
94184989 (JIQ42_01243)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lein03032
]
94184989 (JIQ42_01243)
03400 DNA repair and recombination proteins [BR:
lein03400
]
94184989 (JIQ42_01243)
Enzymes [BR:
lein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
94184989 (JIQ42_01243)
DNA replication proteins [BR:
lein03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
94184989 (JIQ42_01243)
DNA repair and recombination proteins [BR:
lein03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
94184989 (JIQ42_01243)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POL2_thumb
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
zf_DPOE_2
RNase_H_2
zf-DPOE
YopE_N
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
94184989
NCBI-ProteinID:
XP_067705583
LinkDB
All DBs
Position
35:<1844372..>1851280
Genome browser
AA seq
2302 aa
AA seq
DB search
MSTRLESGTREGWLFNYHPTTEVLEEEGAVTGEGAVRAALVLLFQDLAGDTFYVHLHYDP
YILVQAVEGHEREVELGLMSTFGPQIISEIVAVEREDLDLVNHLSGKKRVYLKVVFRNVQ
DLTTVRGRMEKIVKLNASLTSENPLRSQFSGSLGDAMAKTFADGHLSSAAGSSRWMDWVQ
DMREYDVKYHMRVAIDMKVYCGLWYDVTVTDGEAQVERCDDSRYAPAMPRVIAFDIETTK
APLRFPQPEVDEVYMISYMLDGRGYLIVNREIVTEDIAPFEYTPKPEYEGFFDTFNEENE
AATLRRFFDEMRKYKPNVYVTYNGDYFDFPFIHARALYHGMNMRKEIGFAQMADGAFLNQ
QIPHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSV
SDAVSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKK
EIERERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMKFDMNPDTYQCLMDDIDEALRFT
LEVENGVRVEEVTNLEEVREAVLAKLASLRDRPHQQERPFIYHLDVGAMYPNIILTNRLQ
PYAIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENESFAAGV
IEQANLAAVQKKAYGNRKGNVLEGTSYERKDDWKKGQSNRSGGGGAGYRHESRRQQREAA
DALLQHEFGADNRGDGGNSDSDDDADGPKAYHKLNENTQFNMLKRRLSEYSRKAYGKIHE
TREVMRSNVVCQRENSFYVDTVRLFRDRRYEYKAALKKWKKKLDAAKDADERKMCQSRCV
QMESLQLAHKCILNSFYGYVMRKGSRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLEL
DTDGIWCCLPNTFPENFTFTTTNPSKQKISISYPCVVLNKMVHDRYTNHQYQNLVSTGVY
KMHSECSIYFEVDGPYLAMLLPASREEGKSIKKRYAVFNPDGSLAELKGFELKRRGELML
VKDFQSQVFRRFLDGSTLAEAYASAAVVADVALDMLESKGEGYDTEEILEKITESSNMTR
RLSEYPESQKSLAITTARRIAEFLGPQMVKDKGLACHFIISRMPTGRPVTERAIPVTIFR
ADPAVRTHFLRKWTADTTVPTELNFSTLLDWDYYAARFSACVQKIVSIPAALQSLPNPVP
RVAHPDWLEKRIRHSNSRYRQVSLLGMLSKARGANEVLAGESSAAATDASTMREGEDEDV
VTVTQGAVAGAREEQLQDLEDVVGKEHSDMIRSAVKKMGRARAGEQRRTTATAIEADWDE
DDADGEEESEDDVERMQREADAALDVLAHDVKQRYFTPKSTTSLDATFFADLGTKRWLAQ
RKDAWLQRARLRKELALENGLGEVALGGKSGGAASLGLAAESDVAGVNSHFIDLKSRALA
TVWNVLEVRENEESPGTVQVLAALEHSLYSFRVQVRRTVIVDADPVLRLQGFDAAEVSGR
VLPRRAAAGRLYEVDIPPGEEGERRLNELHVMEGVRQIYEEHRSRVDTFVEQLGCCVSVD
AARHLRNARRRPPSQRELFSIDEMNMHSYTNYLSRGAAERVVFIFHAVREQRGLIAAVYA
QTNAAFVVFIQPAEAARPTVNWSTVCEESAKRLHTSTSEPIQVTSEVAVDQRAAWRQVHH
HLSAALESAKAPLLAVLQSCQLTPTLLQQRALPAGLPYLRVLGAAEDERLLSDPFRWARL
LARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVLYIRALHRRHHVLWCS
SDPLITFDTVEERPREVCMAGGYTSWCVEFGLSRLDVVALLFSQAIEEGDDPNARVLCDR
GVSTHFNILRDLVADVLGQAVDNILADTLLNNVARWLRDPASSCYEPRLVELLSSLAHRA
LTGILLRLAKLGGRTVKVDSSSVTVLTSKYSLQEAASFARFITASLQDQPMLLLLSLQPV
RYWCPYIVLDPRGYAGLFVSAEDAVKLKVGEELTRSHLHVAHQLVMASRLPSRVRSTFLE
RVVETLYRLNEAVHRVYCDTVANHAVTLATRHDYLARRLLHDSQSLFERDMQADIMDEVQ
RMTDTRDVYTEEEHAAHERGELTLWSSGAVGLEYAKCLCRVLELIPCNGAVGKVRNNCMR
LCGISPFSAQSQFQVDPFLAHRLQPVTCSFCNSCIAIDLLEKRKSATLPFTCPVCAAPIS
AVAVEGTLVRHVSQLLRVYNQQDFVCAKCHEMTTTYVAERCCGTLVGKGAPIVGELRALH
YLAKIQGFAWLTESVEAALLCS
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcggctggagagtgggaccagggaagggtggctgttcaactaccaccctacg
acggaggtgctggaggaggagggcgccgtcactggcgagggggcagtgcgtgcggcgctt
gtgctgctcttccaggaccttgctggcgataccttctacgtacatcttcactacgacccg
tacatcctcgttcaggccgtcgagggtcacgagcgtgaggtggagctcggcctcatgtcc
acctttggcccgcagataatcagcgaaatcgtcgccgtggaaagggaggatctcgacctc
gtgaatcatctgagtggcaagaagcgcgtctacctcaaggtcgttttccgcaacgtacag
gacctcacgacggtgcgcgggcgaatggagaagattgtcaagctcaacgcctctctcacc
tccgagaacccgctgaggagtcagttcagcgggtcgctaggcgatgccatggcgaagacg
ttcgcggacggtcaccttagcagtgcagccggtagcagccggtggatggattgggtgcag
gacatgcgcgagtacgacgtaaagtaccacatgcgcgtcgccatcgacatgaaagtgtac
tgcggcctctggtacgacgtgacggttacggacggggaggcgcaggtggagcggtgcgac
gacagtcgctacgcaccagccatgccgcgcgtcatcgccttcgacatcgaaacgacaaaa
gcccccctacgctttccgcagccggaggtggatgaggtgtacatgatatcgtacatgctg
gacggccgcggctacctgatcgtcaaccgtgagatcgtcaccgaggacatcgcgccgttc
gagtacaccccaaagcctgaatacgaagggtttttcgacaccttcaacgaagagaacgag
gcagcgacgctgcggcgcttctttgatgagatgcgcaagtacaagcccaacgtgtacgtc
acgtacaatggcgactactttgacttccccttcatccacgcccgtgcactgtaccacggg
atgaatatgcgcaaggagatcggattcgcgcagatggccgacggcgccttcttgaaccag
cagattccgcacctggattgcttctactgggtaaagcgtgactcgtacctgccacagggc
agtcaaggcttaaaggcggtcaccaagtacaagctcggctacgagcctatcgaggtcgac
cccgaagacatgctccctctcgcgcagtcgcagccgcagcgcatggcctcgtactccgtg
tctgacgccgtgtcgacgtggtatctctatcaaaagtacgtgcatccgttcattttttct
ctcgctacaattattccgatgccgccggacgatgtgctgcgcaagggctctggcggtttg
tgcgagtcgctgctaatggtacaggcggaggcaaacaacgtggtgtttcctaacaagaag
gaaatcgagcgggagcggttctacgagggccatctcattgacacggagacgtacatcggt
ggccgtgttgaggctctgcgcagcggtgtgtaccgctccgatattccgatgaagttcgac
atgaatccggacacctaccagtgtctcatggacgacatcgacgaggcgctacggtttact
ctcgaggtggaaaatggcgtgagggtcgaggaggtgacgaacctggaagaggtaagggag
gccgtgctcgccaagctggcgagtctgcgcgaccgaccgcaccagcaagagaggccattc
atctatcacctcgacgtcggcgccatgtacccgaacatcatcctcaccaaccgcctgcag
ccgtatgcgattgcgcggccagacgtgtgtgccgggtgctgcttcaactccccgaacaac
gaggcgcagtgcaagcgcgtcatgtcgtggaagtggagggctgagctcttcaccgccggc
cgctacgagtttcagcgggttaaggcacagctcgagaacgagtcgtttgctgctggcgtg
attgagcaggcgaacctcgccgccgtccagaaaaaggcgtacggcaaccgcaagggcaac
gtgctggagggtacttcgtacgagcggaaagacgactggaaaaagggccagagcaaccga
agcggcggcggcggtgccggttaccggcatgagtcgcggcggcagcagcgcgaggccgct
gacgcgcttcttcagcacgagttcggcgccgacaatcgcggtgacggcggcaactccgac
tcggacgacgacgccgacggcccaaaggcgtaccacaaactgaacgagaacacgcagttt
aacatgctgaagcgtcggctcagcgaatacagccgaaaggcctacggcaagattcacgag
acgcgtgaagtgatgcggtcgaacgtggtgtgccagagggagaactccttctacgtcgac
acagtccgcctctttcgcgaccgccgctacgagtacaaggccgcgctgaagaaatggaag
aagaaactggacgccgccaaggacgcggacgagcgcaaaatgtgccagagccggtgcgta
cagatggaatcgctgcagctggcgcacaagtgcatcctcaactcgttttacggctacgtg
atgcggaagggttcgcgatggtcgagtatggagatggcgggcatcgtcacctacctcggc
gcgacgctgattcagatggcccgctcgcttgtccagcagatcggggtgacgctcgagctt
gacacggacggcatctggtgctgcctgcccaacaccttccccgagaatttcaccttcacc
accacgaacccatcaaaacagaagatatccatatcgtacccgtgcgtcgtgctaaacaaa
atggtgcacgatcggtacacaaatcatcagtaccagaaccttgtcagcacaggcgtgtac
aagatgcacagcgagtgctcaatttactttgaagtcgatggcccgtacctcgccatgttg
ctgcctgctagtcgcgaggagggcaaaagcattaagaagcgctacgccgtcttcaacccg
gacggcagtttggcggagctcaaaggctttgagctgaagcgtcgcggagagcttatgctt
gtcaaggacttccagtcgcaggtattccgccgtttcctcgacggcagcacgctcgcggaa
gcgtacgcgtcggcggctgtcgtggctgacgtcgcgcttgacatgctcgagtccaaaggc
gaaggctacgatacagaggagattctggagaagattacggagagcagcaacatgacgcgg
cggctttccgagtaccccgagtcgcagaagtcgctggccatcacgacggcacggcgcatt
gccgagtttctgggacctcagatggtgaaggataagggcttggcgtgccacttcatcatc
tcccgcatgcccaccggccgccccgttacggagcgagctatccccgtcaccatcttccgc
gcggaccctgccgttcgcacgcacttcctgcgcaagtggaccgctgacacgacggtgccg
accgagctgaatttttcgacgctgctggactgggactactacgccgcgcgctttagcgcc
tgcgtgcagaagattgtgtctatcccggcggcgcttcagtcgctgccaaatccagtgccg
cgggtcgcgcatccggactggctggagaagcgcatccgtcacagcaactctcgttaccgc
caagtctcacttctcgggatgctgtccaaagcacgtggtgcgaacgaggtgctggctgga
gagtcttcggcggcggcgaccgacgcctcgacaatgcgagagggcgaggacgaagacgtc
gtgacggtgacgcagggtgccgttgcaggcgcgagagaggagcagctgcaagacttggag
gacgtggtgggcaaggagcacagcgacatgatacgctccgcagtgaagaaaatgggcagg
gctcgagctggtgagcagcgacgtaccacggcgacggccatcgaagcagactgggatgaa
gacgacgccgatggtgaggaggagtcagaggacgacgtggagcgcatgcagcgcgaggcg
gatgccgcgctggacgtgctcgcgcatgatgtcaagcagcgctacttcacgcctaagagc
acgacctctctcgatgccacgttttttgctgaccttggcacgaagaggtggctggcacag
cgcaaggacgcgtggctacagagagctcgtctgcgcaaggagctggcgctcgaaaacggc
ctgggcgaggtcgcactaggcgggaaaagcggtggtgcggcgtcccttgggctcgccgcg
gagtccgatgtggcgggggtgaacagccacttcatcgatctcaagtcacgcgcgctggca
accgtgtggaacgtgcttgaggtgcgtgagaatgaagagagccccgggaccgtgcaggtg
cttgcggcgctggagcatagcctgtactcctttcgcgtgcaggtgcgtcgcaccgtgatt
gtcgatgctgaccctgtgctgcgcttgcaggggttcgacgccgctgaggtcagcggtcgc
gtactgcctcggcgcgctgcggcaggccgcctctacgaggttgatattccgcctggcgag
gagggggagcggcgcctcaatgagctgcacgtgatggagggtgttcgccagatttacgag
gagcatcgctcgcgcgtggacacgtttgtcgagcagctcggttgctgcgtctccgtcgac
gcggcgcgccacctgcgcaacgcgcgccgtcgcccaccgtcgcagcgtgagcttttcagc
atagatgagatgaacatgcattcgtacacgaattacctcagccgtggtgctgcggagcgt
gtggtctttatctttcacgcggtgagagagcagcgcggcttgatcgctgccgtttacgcg
cagacgaacgctgcctttgtggtcttcattcagcccgcagaggcagcgaggcccacggtc
aactggagcacggtttgtgaggagagcgcgaagcgactgcacacgagcacgtccgagccg
attcaggtcacatccgaggtggcggtagatcagcgggctgcgtggcggcaggtccatcac
cacctgagcgccgccctggagagcgccaaggcgcctctgctggcggtgctgcagagctgc
cagctcacaccgacactcctacagcagcgcgcgttgcccgcggggctgccctacctgcgc
gtcctcggtgccgccgaggatgagagactgctgagcgacccgttccgctgggcgcgtctt
ctggcgcggcgacttttcgagcgctttttcgcgtcgctgttgtgggtagaggagcgtttg
gcgctgagccgtgtctctggcatcccactctgcaacattgcccaagacagctgcgtgcat
gtgctggatgttctgtacattcgtgccctgcatcggcgccaccacgtgctgtggtgcagc
agcgatcccctcatcacctttgacaccgtggaggagcgtccgcgcgaggtttgcatggct
ggcggctatacctcgtggtgcgtcgagttcggcctttctcgcttggacgtcgtcgcgctg
ctcttctcacaggccattgaggagggcgacgacccgaacgcgcgagtgctgtgtgaccgc
ggcgtatccacgcacttcaacatcctgcgtgatctggtagccgacgtactggggcaagcc
gttgacaacatccttgccgacactctcctgaacaacgtggcgcgctggctgcgcgacccg
gcctcctcctgctacgagccgcgcttggtggagcttctcagcagccttgcgcaccgtgcg
ctcacgggcattctgctccgtcttgccaagctgggcggccgcaccgtgaaggtggacagc
agctccgtcaccgttctcacttcaaaatactcactgcaggaagcggcgagctttgcacgc
ttcatcacggcttcgctgcaagaccagcccatgctcctgctgctctccctgcagccagtg
cggtactggtgcccatacattgtgctcgaccctcgcggctacgccggcctgttcgtctcc
gccgaggatgcggtcaagctgaaggtgggcgaggagctgacccggtcgcatctgcacgtg
gcgcaccagctcgtgatggctagccgactacccagccgcgttcgcagcacctttctggag
cgcgtagtcgaaaccctctaccggctgaacgaagcagtacaccgtgtgtactgtgacaca
gtggccaaccacgcagtgacgctcgccacgcgacacgactacctggcgcggcgcttactg
cacgactcgcagagtctctttgagcgtgacatgcaggcagacatcatggacgaggtccag
cgtatgacagacacgcgtgacgtgtacaccgaagaggagcacgcggcacacgaacgcggc
gagctgacgctgtggtccagcggtgccgtcggactcgagtacgcaaagtgtttgtgtcgt
gttctggagctgatcccgtgcaacggtgccgtcggtaaggtgcgcaacaattgcatgcgt
ctctgcggcatcagccccttctccgcccagtcgcagtttcaggtcgacccgtttcttgcg
catcgccttcagcccgtcacgtgcagtttctgcaactcgtgcatcgcgatcgacctgctg
gaaaagcggaagtcggcgacgttgccatttacgtgcccggtttgtgcggcgccgatctcg
gcagttgctgtggaggggacgctggtccgtcatgttagtcaactactgcgagtctacaac
cagcaggactttgtctgcgcaaagtgtcacgagatgacaaccacatacgttgccgaaaga
tgctgcggtaccctcgtcggtaagggggcacccatcgtgggagagctccgggcactccat
taccttgcgaagattcaaggctttgcgtggctcactgagagcgtggaggcggcgctccta
tgctcctga
DBGET
integrated database retrieval system
