Leishmania sp. Namibia: 94185052
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Entry
94185052 CDS
T10410
Symbol
JIQ42_01308
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
lein Leishmania sp. Namibia
Pathway
lein03015
mRNA surveillance pathway
lein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
94185052 (JIQ42_01308)
09123 Folding, sorting and degradation
03018 RNA degradation
94185052 (JIQ42_01308)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lein03019
]
94185052 (JIQ42_01308)
03041 Spliceosome [BR:
lein03041
]
94185052 (JIQ42_01308)
Messenger RNA biogenesis [BR:
lein03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
94185052 (JIQ42_01308)
mRNA cycle factors
Stress granule specific factors
94185052 (JIQ42_01308)
Spliceosome [BR:
lein03041
]
Complex C
Other components
Complex C specific factors
94185052 (JIQ42_01308)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_7
DUF4523
RRM_8
Motif
Other DBs
NCBI-GeneID:
94185052
NCBI-ProteinID:
XP_067705646
LinkDB
All DBs
Position
35:<2056501..>2058183
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AA seq
560 aa
AA seq
DB search
MTAIVQETASPVAPPQLVGKPMHIASIYVGDLDAAINEPQLVEMFKPFGTILNVRVCRDI
ITQRSLGYGYVNFDNHDSAEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNL
EKDVDSKSLHDIFTKFGSILSCKVMQDEEGKSRGYGFVHFKDEASAKDAIVKMNGVPDHA
SEDKKALYVANFIRRNARLAALVANFTNVYIKQVLPTVNKEVIEKFFAKFGGITSAAACK
DKNCRVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYM
QHQSLGNNLYVRNFDAEFTSADLLELFKEYGEIKSCRVMMSESGASRGFGFVSFSNADEA
NAALREMNGRMLNGKPLIVNIAQRRDQRYTMLRLQFQQRLQMMMRQMHQSMPFVGGQVRP
MRGRGGRQQQGGRAQGQPMPMPSPQQPLAPAQPQGFATPSAVGFVQATPKHSPGQVPETP
PLPPITPQELESMSPQEQRAALGDRLFLKVYDIAPELAPKITGMFLEMNPKEAYELLNDQ
KRLEDRVTEALCVLKAHQTA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactgctattgtccaggagacggcttccccggtggcaccgccgcagctggtcggcaaa
ccgatgcacatcgcttccatctacgttggtgaccttgatgccgccatcaacgaaccacag
ctggtggagatgttcaagccgtttggcaccatcctgaacgttcgtgtctgccgcgacatc
atcacacagcgctcactgggctacggctacgtcaactttgacaaccacgacagcgcagag
aaagcgatcgagtcgatgaacttcaagcgcgtcggcgacaaatgcgtgcgcctcatgtgg
cagcagcgcgatcccgcccttcgctacagtggcaacggcaacgtgttcgtgaagaacctg
gagaaggatgtcgacagcaagagcctgcacgacatcttcaccaagttcggctcgattctc
tcctgcaaggtaatgcaggacgaggagggcaagagccgcgggtacggtttcgttcacttc
aaggatgaggcgtctgccaaggacgcaattgtgaagatgaacggcgttcccgatcacgcc
tcggaggacaagaaggcgctgtacgtggccaacttcattcgccgcaacgctcgcctcgcc
gcgctcgtggccaacttcacgaacgtgtacattaagcaggtgcttccgacagtgaacaag
gaagtcattgaaaagttcttcgccaagttcggcgggatcacgtccgctgcggcctgcaag
gacaagaactgccgcgtgtttgccttctgcaactttgagaagcatgacgacgccgttaag
gcggttgaggcgatgcacgaccaccacatcgacgggattacagcgcctggcgagaagttg
tacgtgcagcgcgcccagccccgcagcgaacgccttatcgctcttcgccaaaagtacatg
cagcaccagtctctcggcaataatctgtacgtacgcaacttcgatgccgagttcactagc
gccgacctgctcgagctcttcaaggagtacggcgagatcaagagctgtcgcgtcatgatg
agtgagagcggcgcgagtcgtggcttcggtttcgtcagcttctcgaacgccgacgaggcc
aatgccgcgcttcgcgagatgaacggtcgcatgctgaacggcaagccccttattgtgaac
attgcgcagcgccgagaccagcggtacacaatgctgcgcctgcagttccagcagcgtctg
cagatgatgatgcgccagatgcaccagtcaatgccgttcgtcggcggccaagtacgcccg
atgcgcggccgtggcggtcgccagcagcaaggcggtcgcgcgcaagggcaaccgatgccg
atgccctcaccacagcagccactggccccagcgcagccgcagggcttcgccacaccgtcg
gccgtcggcttcgtgcaggcgacgccgaagcactctcccggtcaggtcccggaaacgccg
ccgctgccgccaatcacgccccaggagctggaaagcatgtcgccgcaagagcaacgagcc
gccttgggtgaccgcctcttcctgaaggtgtacgacatcgcgccggagctggcgccgaag
attacgggtatgttcctcgagatgaaccccaaggaggcgtacgagctgctcaacgatcag
aagcgcctcgaggaccgcgtgacggaggcgctctgcgttctcaaggcgcaccagacagcg
tag
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integrated database retrieval system
