Leishmania sp. Namibia: 94185127
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Entry
94185127 CDS
T10410
Symbol
JIQ42_01385
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lein Leishmania sp. Namibia
Pathway
lein03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
94185127 (JIQ42_01385)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lein03021
]
94185127 (JIQ42_01385)
Enzymes [BR:
lein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
94185127 (JIQ42_01385)
Transcription machinery [BR:
lein03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
94185127 (JIQ42_01385)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Umbravirus_LDM
Motif
Other DBs
NCBI-GeneID:
94185127
NCBI-ProteinID:
XP_067705721
LinkDB
All DBs
Position
34:166986..171752
Genome browser
AA seq
1588 aa
AA seq
DB search
MAQATTTAAQFVQPLLDKPVEVTSIKYGLLSDDAIHRLSVLPCHRVIGTEKNFGVNDSRL
GPSDRLSVCTTCGQRSIECTGHAGHIDLEVPVFHLGYFSAVIRVCRTICKRCSNVLLTRE
EMEYYLRRLRSTAHEPQQRAAIVKGIQEDAYKTRVCLMCGGLNGTVRRVRPMRIVHEKYL
IDLRRGEQANEDPAAFFQEELRSAVMHNSEVGSHKEFVHEFLHPQRVKELFEAIPLEQVP
LLGLQPGTSPCSLLISTLLVPPVCVRPRGMSATNHIREDDLTTQYNEILICSDMMNDGTN
DAARSVETWELLQTRVARLLDAALPGFPSHLRTVECKSYAQRMKGKQGRFRGNLSGKRVD
FSGRSVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHLHPGALTVY
LSKECSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVL
PFRTFRFNECCCAPYNADFDGDEMNIHVVQTEEARAEAKELMLTSHNIITAKNGEPIIAC
TQDFLTAAYLVTARDALFDRASFTQMVSHWLGAETQYALPIPAILKPAELWTGKQLFELI
LRPTPETQLLLNLEAKARFYSGAGGHDDPAEGYVAFLDSVFLSGRLDKKLLGGGAKDGLF
ARLYALGGGEQTATCMSRIAQFTARHLQNYGFSLGLGDVSPTPSLSEKKAAVLAVSFDKC
DRLISLAKTGRLIPKPGMSVKQSLEAMLNAELSQVRDACGSAAVQALDAKSNAPLIMVNS
GSKGSALNTAQMMACVGQQTVSGKRIMNAFQDRALPHFPRFAEDPASRGFVANSFYSGLS
PTEFFFHSMAGREGIVDTAVKTAETGYIYRRLSKAMENLSVGYDASVRSVQGSIVQLRYG
EDGMDPWLMEGSHGTPLNLDQEWISNRAAYARFRKEIDAVMKAKSSNNGLAASADPLLST
YHKLYDEWHAVSMLPGELDAFVYCLLHADAATLASCAHLMEVEAAIRGAAPSSAASGLQL
LQQLARQHGSDRLRSDIQAFFRKKRDELVRLRQKLKLPLDDHTTAADAAATATAKAVRGG
AGHESARQNDALPSLTAGTPASAAERRALAESLQAELLPLTKGMLLRFLEASARKVRRKL
CEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEIINANKNISTPVIT
APIILEDEFMSVDLAPARRTQHQAARAVKGLMERVLLKEITREMVEVVTPRQYYIQIFLD
MVLIERLLLPIDAAVVCQRLYAAAARPMSPLRHLTEACVKVVSRDSLIVKPYEKDPMRVH
FNIQHLLTLLPELVVGGVPGVNRVMITDRSEKLLAEGAELLSVMSLPYVDGVRTTCNHVA
VVERTLGIEAARETIVKEITSILQAYSLNIDIRHIYLLADVMTNRGVVLGITRYGIQKMN
NNVLTMASFERTTEHLYNAAMTEREDVNLSVSESIIIGKPIPLGTSSFNILLDKGSIAPP
GSNTGRMPSPQASANVAAITTVTSRSTGKMAAGKHSQKVVPTPKELFLRSSYTAYAAAYG
SGAHRRPRGGFSSQPLSAEGVFRLDLPL
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcgaccacgacggcggcgcagtttgtgcagccgctgcttgacaagcctgtg
gaggtgacctcgatcaagtacggtctcctctctgacgacgcgatccaccgcctctcggtc
ctgccctgccaccgcgtgattgggaccgagaaaaacttcggcgtcaacgatagccgcctt
ggcccgagcgaccggttgtcggtgtgtaccacctgcggccagcgcagtatcgagtgcact
ggccacgccggccacatcgacctcgaggtgcccgtcttccacctcggctacttctctgcc
gtcatacgagtgtgccgcaccatctgcaagcgctgctccaacgtgcttctgacgcgtgag
gagatggagtattacctgcgccggctgcgatccacggcgcatgagccgcagcagcgcgcc
gccatcgtcaagggcattcaggaggacgcctacaaaacacgcgtgtgtctcatgtgcggc
gggctgaatgggacagtgcggcgggtgcggcccatgcgcattgtccacgagaagtacctg
atcgatttgcgtcgcggtgagcaggcgaacgaggacccggccgcgtttttccaggaggag
cttcgctccgctgtgatgcacaactcggaggtgggctcgcacaaggagttcgtgcacgag
tttctgcacccgcagcgggtgaaggagctgttcgaggcgattccactggagcaggtgcct
ttgttaggcttgcagcccggcaccagtccgtgcagccttctcatcagcaccttgctcgtc
ccgcccgtatgcgtgcggccgcgcggtatgtcggcgacgaaccacatccgtgaggatgac
ttgacgacgcagtacaacgagattctcatctgctctgacatgatgaacgatggcacgaac
gacgccgcgcgcagtgtagaaacgtgggagctgctgcagacgcgtgtggcgcgcctgctg
gatgcggcgctgccggggtttccttcgcatctccgcaccgtggagtgcaagtcttacgcg
cagcgcatgaagggcaagcagggccgcttccgaggtaaccttagcggcaaacgcgtcgac
ttctctggacggtctgtcatttcaccagaccccaatcttcgcatcgacgagctcgccgtg
ccgctgcgcgtcgcgcgggtgctgacgtacccgcagcgtgtctttgcaggaaacattcag
ctcatgcgtcgactcgtgcgcaacggcccgcacctgcatcccggcgccctcaccgtttac
ctctcgaaggagtgttcgcgcaagtcgctgcgcaacgcccgcgaccgcgaggccatcgcg
gcgcgcctcagcatcggcgacgttgtggagcggcatgtgatgaacggcgactacatcctc
ttcaaccgccagccgtcgctgcaccgcatttcgctcatggcgcaccgcgcgcgtgtgctg
cccttccgcacgtttcgtttcaacgagtgctgctgcgcgccgtacaacgctgacttcgac
ggcgacgagatgaacatccacgtcgtgcaaacggaggaggctcgcgcagaggcgaaggag
ctgatgctgacatcgcacaacatcatcaccgccaagaatggcgagcccatcatcgcctgc
acgcaagactttctgaccgccgcctacctcgtgaccgcccgcgacgcccttttcgaccgc
gcgtccttcacgcagatggtgtcccactggctcggcgccgagacacagtacgcgctgccg
ataccggccatcctgaagccggcggagctgtggaccggcaagcagctcttcgagctcatc
cttcggccgacgcccgagacgcagctgctgctgaacttggaggcgaaggcgcgcttctac
tctggcgctggcgggcacgatgacccggcggagggatacgtggcgttcctcgactcggtc
tttctctcgggtcgactcgacaagaagctgctgggcggcggcgccaaggacggactcttt
gcccgcctctacgccctgggcggaggggagcagacggcgacgtgcatgtcgcgcatcgcg
cagttcaccgcccgccatcttcagaactatggcttttccctcggcctcggtgatgtgtcg
ccgacgccgtcgctcagcgagaagaaggccgccgtgctcgccgtgtctttcgacaagtgc
gatcgcctcatctctctggccaagacgggccgacttatccccaagcctggtatgagcgtg
aagcagagcctggaggcaatgctgaacgcggagctgtcgcaggtgcgtgacgcgtgtggc
tcggccgctgtgcaggcgctggatgccaagtcgaacgcgcctctaatcatggtgaactct
ggaagcaagggcagtgccctcaacactgcacagatgatggcgtgtgtggggcagcagacg
gtcagcggaaagcgcatcatgaatgccttccaggaccgcgccctaccgcacttcccgcgc
ttcgccgaggaccctgcgtcgcgcggctttgtggccaactccttctactctggcctgtcg
ccgacggagtttttctttcacagcatggctggtcgcgagggcatcgttgatacggccgtc
aagactgcagagacgggttacatctaccgccgcctcagcaaggccatggaaaacctgagc
gtaggctatgacgcctcggtgcgcagcgtgcagggcagcattgtgcaactgcgctatggc
gaggatggcatggacccgtggctgatggaggggtcgcacggtacgccgctcaacctcgac
caggagtggatcagcaaccgagccgcctatgcccgctttcgaaaggaaatcgacgccgtc
atgaaggcgaaaagcagcaataatgggctggctgcatcagcggacccgctgctctccacg
taccacaagctgtacgatgaatggcacgccgtgtcgatgctccctggcgagctggatgca
ttcgtgtattgtctgctacacgcggatgcggcaacgctagcgtcctgtgcccacctgatg
gaagtagaggcggcgatccgcggtgccgcgccgtcgtccgccgcctctggcctgcagttg
ttacagcagctcgcacggcagcacggcagcgaccgtctgcgcagcgacatccaggcgttc
ttccgcaagaagcgcgatgagctggtacggctgcggcagaagctgaagctacccctggac
gaccataccactgcggctgatgcagcggcaacggccaccgccaaagcagttcgcggcgga
gcagggcacgaatcagctcggcaaaacgacgcgctaccctcgctcacggccggcacaccg
gccagcgcagctgaacggcgggcgctcgccgaatcgctgcaagccgagctgctgccgctc
acaaaaggaatgctgcttcgctttctcgaggcttcagcgcgcaaggtgcgccgcaagctt
tgcgagcccggcacgccgtgcggcgccattgccgctcagtccgtgggcgagcccagcacg
cagatgacgctccgcacgttccacttcgcaggggtggccagcatgagcattacgcagggt
gtgccacgcctcgtggaaatcatcaatgccaataagaacatctccaccccagtcatcacg
gccccgattattctcgaggatgagttcatgtcggtagacctcgcgccagcacgccgcacg
caacaccaagccgctcgcgctgtgaagggcctgatggagcgggtgctcctgaaggaaatc
acacgcgaaatggtggaagtggtgacgccgcggcagtattacattcaaattttcctcgac
atggtgctgatcgagcgtctgctgctgccgattgatgcggcggtggtgtgccagcggctc
tacgcggcggccgcgcggccaatgtcgccgctgcgccacctcactgaggcgtgtgtcaag
gtggttagtcgcgactccctcatcgtcaagccttacgagaaggacccgatgcgtgtgcac
ttcaacattcagcatctgttaaccctcttaccggagctcgtggtcggtggcgtgcccggc
gtcaaccgagtcatgattaccgaccgctcggagaagctgctggcggagggggcagagctc
ttgtcggtcatgtcgctgccgtacgtggatggtgtgcgcaccacgtgcaaccacgtcgcc
gtcgtggagcgcacgcttggtatagaggctgcccgagagactatcgtgaaggaaatcacg
agcatcctgcaggcctactcgctcaacatcgacatccggcacatctacctcctcgctgac
gtgatgacgaaccgcggcgtggtgctcggcatcactcgatatggcatccagaagatgaac
aacaacgtcctcaccatggcttctttcgagcgcaccaccgagcacctctacaatgcggcg
atgacggagagggaagacgtcaacctcagcgtctctgaaagcatcatcattggcaagccg
atccctctcggcaccagcagcttcaacatcctgctcgacaagggcagcatcgcgccgccc
ggctccaacacaggccgaatgccgtcgccccaggccagcgccaacgtggcagccataaca
acagtgacctcgcggtccaccggcaagatggcggctggcaagcactctcagaaggtggtg
ccgacaccgaaggagctgttcctgcgcagctcttacacggcgtacgccgccgcgtacggg
tcgggggcacatcgacgcccgcgcggcggcttttcgagtcagccgctctccgccgagggc
gtcttccggctggatctcccgctatga
DBGET
integrated database retrieval system