KEGG   Leishmania sp. Namibia: 94185554
Entry
94185554          CDS       T10410                                 
Symbol
JIQ42_01819
Name
(RefSeq) hypothetical protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
lein  Leishmania sp. Namibia
Pathway
lein03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lein00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    94185554 (JIQ42_01819)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lein03019]
    94185554 (JIQ42_01819)
Messenger RNA biogenesis [BR:lein03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     94185554 (JIQ42_01819)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WDR55 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR90_beta-prop_4th LisH_CTF50 Beta-prop_Aladin WD40_MABP1-WDR62_1st CSTF1_dimer Beta-prop_DCAF4 TAF1C_C LAL_C2 ASA1 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 94185554
NCBI-ProteinID: XP_067706148
LinkDB
Position
33:complement(<81976..>83616)
AA seq 546 aa
MFSPSGSRGSAGFAGRPGDTAAPPSSATGRPHTEVMAGGSQPHRKRPRQGILVDPLAREV
YQMVVRQLHHDGFLAAASAVCDATGVVVNNVEDEGDRLARVVAAGLSVGEMERRAEEEFY
LTQVVERYLSASKLYVPLSLSSRWSVGRRCLRMRERFISASLGGVVRDISFSSDGAHVTC
AGTNGLAAIFSLETIEDLSALDETRAANRARALDGSRDPGSFGSGETAPKGSAIRNANEI
TELSMVRRFHEHTQSVEVMRFHPTKPIVLSGGREGDLYLRDYAYPDSKVLLKVHDTVPIR
DASFHPSGEYIVVAANHHLPRLINVRTEKVLTPPGTYASSTAKTGSQWESEESGNAATSY
RPTDRGAQHSAALSSVCFAPDGRTMISTSLDGTWMLYDGVSGRVIYRAENAHSGVPVTSV
VYSRTGNIVLTAGMDSTARLWDLRRLHATSRNYQSPEVNSFGEPTKCDHRSIRAVFSANE
SHVHCHDSTLLAVHSYCVYTGAVASTLTTQPSFVQRGLAASPWANCIVTGGDDSRLRLWT
PAWLPS
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgttttcgccgtccggctctcgaggttctgcgggttttgcgggcagacccggggatacc
gcggccccaccgtcatcggctactggccggcctcatacggaagtgatggcgggcggatcg
caacctcaccgcaagcgcccccggcaaggcattctcgtggatccgctcgctcgtgaggtg
tatcagatggtagtgcgtcagcttcaccacgacggtttcctggccgctgcttctgctgtc
tgcgacgccaccggggtcgtggtgaataacgtggaagatgaaggtgaccgtctcgcacgg
gtagtggcggcgggactgagtgttggtgagatggaacggcgtgcggaggaggagttttac
ttgacccaggtggtggagcgttatctcagcgcgtcgaagctgtacgtgcctctttcgctg
tccagccgctggtcggtgggacgtcgatgcctgcgcatgcgcgagcggttcatttcggct
tctctcggcggtgttgtgcgagatatctccttttcttcggatggggcccacgtcacgtgc
gccggcactaatggtcttgcggccatcttttcccttgagacgatcgaggatttaagcgcg
cttgacgagacgcgtgccgcgaaccgcgcgagggcgcttgatggcagccgtgatcctggc
agcttcggcagtggtgaaaccgctccgaaaggctctgctatccgcaacgccaacgagata
acagagctttcgatggtgcgccgatttcacgagcacacgcagtccgttgaggtgatgcgt
ttccaccccaccaaacccatcgttctctccggcggccgcgaaggcgatctgtacttgcgc
gactacgcctatcctgactcgaaggtgttgctgaaagttcacgacaccgtcccgattcga
gacgcgtcctttcacccgtctggggagtacatcgttgtggcggcaaatcaccatctgcct
cggctgattaacgtgcgcacggagaaggtgctcacaccccctggcacctacgcgtcctcg
acggctaagacagggtcacagtgggagagcgaggagagcggcaatgcagctacttcgtac
cggccgaccgatcgcggggcgcagcacagcgctgcgctgtcgtcggtgtgcttcgctcct
gacgggcggacgatgataagcacaagccttgatggtacctggatgctgtacgacggcgtg
agcgggcgcgtgatctaccgcgcagagaacgcgcactctggcgttcctgtgacgagcgtt
gtgtacagccgaacaggcaacatcgtgctgacggcaggtatggactcaacggcacgcctg
tgggacctgcgccgactccatgcaacgtcgcgcaactaccagagcccagaggtgaactct
ttcggcgagcccaccaagtgtgaccatcgcagcatacgagccgtgttctccgcgaatgaa
agccatgtgcactgccacgactccactcttcttgctgtgcacagctactgcgtttacacc
ggagcggtggcctccaccttgaccacgcagccaagctttgtgcaaagaggtcttgcggcc
agcccgtgggccaactgtatcgtcacaggaggtgatgacagtcgactgcgtctgtggact
ccagcgtggcttccgtcgtga

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