Leishmania sp. Namibia: 94186578 Help Entry 94186578          CDS       T10410                                  Symbol JIQ42_02884 Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism lein  Leishmania sp. Namibia Pathway lein03020   RNA polymerase lein03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:lein00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     94186578 (JIQ42_02884)   09124 Replication and repair    03420 Nucleotide excision repair     94186578 (JIQ42_02884)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lein03021]     94186578 (JIQ42_02884)    03400 DNA repair and recombination proteins [BR:lein03400]     94186578 (JIQ42_02884) Enzymes [BR:lein01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      94186578 (JIQ42_02884) Transcription machinery [BR:lein03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      94186578 (JIQ42_02884) DNA repair and recombination proteins [BR:lein03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       94186578 (JIQ42_02884) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7 PspA_IM30 Motif Other DBs NCBI-GeneID:  94186578 NCBI-ProteinID:  XP_067707172 LinkDB All DBs Position 31:complement(<1407979..>1412967) Genome browser AA seq 1662 aa AA seqDB search MSGGAPLPPSQMPLQKVHDVQFEVFKEAQIKAYAKCIVEHAKSYEHGQPVRGGINDLRMG TTDFEYSCETCGLKHPECPGHFGYVELAEPIFNINVFDVVLIALKCVCKYCGALLMDTND PSELKKIAHLQGLNRLRMVAKLCGSMCKRSKDIQGCEGKGRQPRIGRFAGIYPGLQIKVT QEEQDYVWHAENARQVLDRVSDSDAVIMGFDPRFCHPRDLILTVLPIPPPQVRPAVAFGS AKSDDELTHQIMSIVKRNIQLRKDKESGVKAAVDRSRALLQEHVATFFNNASTYYKPAKV GDTKKLKSLTERLKGKYGRLRGNLMGKRVDFSARTVITGDPNIDVDEVGVPFSVAMTLTF PERVNVINKKRLTEFVQRTTYPSANYIIRPNGNVTKLALVKDRSAVNLDVGDVVERHVID GDVVLFNRQPTLHRMSMMGHRVRVLNYNTFRLNLSCTTPYNADFDGDEMNLHVPQSLLTK AELIEMMMVPKNFVSPNKSAPCMGIVQDSLLGSYRLTDKDTFVDKYFIQSVALWLDLWEL PIPAILKPRPLWSGKQIFSLILPEVNHPASPYDKPPFPHNDKKIMIQRGQLLVGAITKGV VGAAPGSLIHVIFNERGSDEVAKFINGVQRITTYFNYCFAFSVGVQDTVADATTLKEMNN VLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTN SFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPHFMLDDYGETSRGMAT RGYVEGLQPHEFYFHTMAGREGLIDTAVKTSDTGYLQRKLVKALEDVHASYDGTVRNANQ ELIQLAYGEDGLDGARIEGNQAFPIPHMTNSEMVDRYRYEYRDEGGFSDSMGGQYMDPFV RDSLLRDPQSVLRLQEEFDQLMKDRAMSRLIIDMEDKNKLKMNLPVNVARLIQNARTTMG KRSQVSNLNPITVINRVRELQEDLVQLFPSHHKDYHGRFVNALSRERVERALTLFGIHLR QILGSKRVLKEYKLNDKAFEYLLKEIRTKYQQSLITPGEIIGAIAAQSCGEPATQMTLNT FHNAGISSKNVTLGVPRLLELLNVSKNQRNASVAVCLIHEYQKRNKAQEAQQFIEYCTLA NITTTVQIIYDPNPRNTVVAEDEEMIRWEQAVMNEEEEEQDADQPPSPFIARLILDNDLF NDKRLNMKDVKSAIRQVDDTYTVQANMESDGQRIVRLRPRKCAGADSVPALTKAVAQLLQ SVHLRGIPGIKKTLLKEGNTFRVDPETGGIKNDSSWMVDTEGTALQRIFVGVVNSEGKNI IDFAKTSSNKIPEVMTVLGIEAARRKLLFELREAYLAYGLNINYRHYTILVDTMCQRGYL MAVSRTGINRSETSGPLMRCSFEETVKVLMTAAAFGEKDPVRGVSANLVLGNQARIGTGL FDLMLDMSKLQHVVPLDKATEARTSNVYHTDASVAPGSSMLQGSHGELPPSTVHENSSLA AGASSVYPRQGGAGMYGGIPIEASEVQLSSVLPVTMGAALAAANMSEYHSSHRHSGASTY LASSVPPSTSALDAELSSYHLQSVAGSTAYGDALTAAYGIPMPAISQLPVGEGSSMPYPY EASNGDHFGSLGGAASSWASAPYDPTQQPSQEFSPTEEQEEP NT seq 4989 nt NT seq  +upstreamnt  +downstreamnt atgtcgggtggcgcgcctctcccgccttcgcagatgccgctgcagaaggtgcacgacgtt cagtttgaggttttcaaggaagctcaaatcaaggcctacgccaagtgcatcgtcgagcat gccaagtcctatgagcacggccagccagtgcggggtggcataaacgacctgcgcatgggc acgacggacttcgagtatagctgcgagacttgcgggctgaagcacccggaatgcccgggc cactttgggtacgtggagctggccgagccgatcttcaacatcaacgtgttcgacgtcgtg ctgatcgccctgaagtgcgtctgcaagtactgcggcgcgctgctgatggacacaaacgac ccgtcagagctgaagaagatcgcgcatctgcagggcctcaaccgcctgcgcatggtcgca aagctctgcggcagcatgtgcaagcgcagcaaggacattcaaggctgtgagggcaagggc cgccagccacgcatcggccgcttcgctggcatctacccgggtctgcagatcaaggtgact caggaggagcaggattacgtgtggcatgccgagaacgcacggcaggtgctggatcgtgtg tcggacagcgatgccgtcatcatgggcttcgacccgcgcttctgccacccgcgcgacttg atcctcacagtgttgcccattcccccgcctcaggttcgccctgccgtcgccttcggctcg gccaagtcggatgatgagctcacgcatcaaattatgtccatcgtaaagcgcaacattcag ctgcgcaaggacaaggagtccggcgtcaaggccgccgtggaccggtcgcgcgcacttctg caggagcacgtcgccaccttcttcaacaacgcctccacgtactacaagcccgccaaggtc ggcgacaccaagaagctgaagtcgctcacggagcggttgaaaggtaagtacggccggctg cgcggtaacctcatgggtaagcgcgttgacttttcggcgcgcacggtcatcaccggtgac ccgaacatcgacgtcgacgaggtcggcgtgccgttctccgtcgccatgacgctgacattt ccagagcgcgtgaacgtgatcaacaagaagcggttgacggagttcgtgcagcgcaccacg tacccctcggcaaactacatcatccggccgaatggcaacgtgacaaagctggccctcgtc aaggatcgcagcgccgtcaacctagacgtcggtgacgtggtcgagcgccacgtcatcgat ggcgacgtcgtcctcttcaaccgccagccgacgctgcaccgcatgagtatgatggggcac cgcgtccgcgtgctcaactacaacaccttccgtcttaacctgtcctgcacgacaccgtac aacgccgacttcgacggcgatgagatgaacctgcatgttccgcagtcgctgctgacgaag gcggagctgattgagatgatgatggtgcccaagaacttcgtgtctccgaacaagtcggcg ccgtgcatgggcatcgtgcaagacagccttctcggaagctaccgcctcaccgacaaagac acgttcgtggacaagtacttcattcagagcgtggcgctgtggttggatctatgggagctg ccgatcccggccatcctgaagccacgtccgctgtggagcggcaagcaaatcttctcgctc atcttgccggaggtcaaccaccctgcctccccgtacgacaagccgcccttcccgcacaac gacaagaagatcatgatccaacgaggccagcttctggttggcgcgattacgaagggcgtc gtcggcgccgccccggggtcgcttattcacgtcatcttcaacgagcgcggctccgacgag gtggccaagttcatcaacggtgtgcagcggatcacgacgtacttcaactactgcttcgcc ttctcggttggcgtccaggacactgtggcggatgcgacgacgctcaaggagatgaacaac gtgctgcacaagacacgacagtccgtcgagaagatcggcgctgctgcgaacaacggcaag ctgacccggaaggccggcatgtcgttgctgcagtccttcgaggcggatgtgaacagtgcc ttgaacaagtgtcgcgaggaggcggcgaagaaggcgctgagtaatgtgcgccgcacgaac agcttcaaggtcatgatcgaggccggcagtaagggcagtgatctgaatatttgccagatt gcggtgttcgtcggccagcagaacgtcgcaggcagccgcatcccctttggcttccgtcgc cgcacgctgccgcacttcatgttggacgactacggtgagacctcgcgcggcatggcgacg cgcgggtacgtggagggactgcagccgcacgagttttacttccacacaatggcggggcgt gagggcctcattgacacagccgtcaagacctccgataccggctacctgcagcgcaaactc gtgaaggcgctggaggacgtgcacgcttcgtacgacggcacggtgcggaacgcgaatcag gagctcatccagctggcgtatggcgaagacggtctggatggcgcacgcatcgagggcaac caggccttcccgattccgcacatgacgaactcagagatggtggacaggtaccgctacgaa tacagggacgagggcggcttctcggacagcatgggcggccaatacatggatccgttcgtg cgcgactcgctgctgcgcgatccgcagagcgtgctgaggctgcaagaggagttcgaccag ctcatgaaggaccgcgcgatgtcgcgcctcatcatcgacatggaggacaagaacaagctc aagatgaacctgcccgtgaacgtcgcgcgtctcatccagaacgcgcgcacgacgatgggt aagcgcagtcaggtgtcgaacttgaacccgatcactgtgatcaaccgcgtgcgggagctg caggaggaccttgtgcagctgttcccctcacaccacaaggactaccacggccgcttcgtg aacgcgctcagccgggagcgcgtggagcgggcgctgacgctcttcggcatccacctgcgc cagattctcggctccaagcgggtactgaaggagtataagctgaacgacaaggcgttcgag tacttgctgaaggaaatccgtaccaaataccagcagtccctcatcacccctggtgagatc attggcgccatcgccgcgcagtcgtgcggcgagccagcgacgcagatgacgctgaatacc ttccacaacgccggcatctcgtccaagaacgtgaccctcggcgtgccgcggctactggag ctgctgaatgtaagcaagaaccagcgcaatgccagcgtggccgtctgcctcatccacgag taccagaagcgcaacaaggcacaggaggcacagcagttcatcgagtactgcacgctagcg aacatcacaacaacggtgcagatcatctacgaccccaacccgcgaaacaccgtcgttgcc gaagacgaggagatgattcggtgggagcaggcggtgatgaacgaggaggaggaggagcag gacgcggaccagccgccgtcgccctttatcgcgcgccttatcctcgacaacgacctcttc aacgacaagcggcttaacatgaaagatgtgaagagcgcgatccggcaggtggacgacacc tatacggtgcaggcgaatatggagagcgacggccagcgcattgtgcggctgcgtccgcgc aagtgcgccggggcggactccgtgccggcgctcacgaaggcggtcgcgcagctgctgcaa agcgtgcacctgcgcggcatccctggcatcaagaagacgctgctgaaggaaggcaacacg ttccgcgtggatcccgagacgggaggcataaagaacgattctagctggatggtggacacc gagggaacggcgttgcagcgcatctttgtcggtgtggtgaacagcgagggtaagaacatc atcgacttcgccaaaactagcagcaacaagatccctgaggtgatgacggtgcttggcatc gaggcggcgcggcgtaagctgcttttcgagctgcgcgaagcgtatctagcctacgggctc aacatcaactaccgccactacaccatccttgtcgacaccatgtgccaacgcgggtacctg atggctgtcagccgcactggtattaaccgcagcgaaacatcggggccgctgatgcggtgt tcctttgaggaaacagtaaaggtgctcatgacagcggccgcgtttggcgagaaggatccg gtgcgcggagtgtcggcaaacctcgtgctcggcaaccaggcccgcattggcaccggcttg ttcgatctcatgctcgacatgagtaagctgcagcacgtggtgccgctcgataaggccacg gaggcgcgcacctcgaacgtgtaccacaccgatgcgtccgtcgcaccgggctcctcaatg ctgcaggggtcgcatggcgagctgccgccgtcgacggtgcacgagaacagctctcttgct gccggcgcctcctccgtgtacccgcggcaggggggagctggcatgtacggcggtatcccg atcgaggcgagtgaggtgcagttgagcagtgtcctgccggtgacgatgggcgctgctttg gctgctgcgaatatgagcgagtatcacagcagccaccgccattcaggcgcctcgacgtac ctggcgtcgtcggtaccgccgagcacgagcgcgcttgatgccgagctttcctcgtaccat ctgcagtctgtcgccggctctaccgcgtacggcgacgcgctcaccgcggcgtatggaata ccgatgcctgccatttcccaactgccggtcggtgagggtagcagcatgccgtacccgtac gaggcgtccaacggcgatcacttcggctccctcggcggcgcggccagctcatgggcgagt gcgccctacgaccccacgcagcagccgtcacaggaattctcgcccaccgaggagcaggag gagccgtga

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