KEGG   Leishmania sp. Namibia: 94186809
Entry
94186809          CDS       T10410                                 
Symbol
JIQ42_03122
Name
(RefSeq) hypothetical protein
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
lein  Leishmania sp. Namibia
Pathway
lein03013  Nucleocytoplasmic transport
lein03015  mRNA surveillance pathway
lein03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lein00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    94186809 (JIQ42_03122)
  09122 Translation
   03013 Nucleocytoplasmic transport
    94186809 (JIQ42_03122)
   03015 mRNA surveillance pathway
    94186809 (JIQ42_03122)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lein03019]
    94186809 (JIQ42_03122)
   03041 Spliceosome [BR:lein03041]
    94186809 (JIQ42_03122)
   03009 Ribosome biogenesis [BR:lein03009]
    94186809 (JIQ42_03122)
   03012 Translation factors [BR:lein03012]
    94186809 (JIQ42_03122)
Enzymes [BR:lein01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     94186809 (JIQ42_03122)
Messenger RNA biogenesis [BR:lein03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     94186809 (JIQ42_03122)
   mRNA cycle factors
    Stress granule specific factors
     94186809 (JIQ42_03122)
Spliceosome [BR:lein03041]
 Complex C
  Other components
   EJC/TREX
    94186809 (JIQ42_03122)
Ribosome biogenesis [BR:lein03009]
 Eukaryotic type
  90S particles
   Helicases
    94186809 (JIQ42_03122)
Translation factors [BR:lein03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    94186809 (JIQ42_03122)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 Cas3-like_C_2
Other DBs
NCBI-GeneID: 94186809
NCBI-ProteinID: XP_067708064
UniProt: A0A836HSG7
LinkDB
Position
28:595408..596577
AA seq 389 aa
MEVEQVDNIQANVLAIPTFEAMGLKEELLKGMYSFGYKQPTAIQKRFIMPFLKGRDVIAQ
ASSGTGKTSAFCVCLLQACDPHTRETQALILSPTRELAVQTQDLCNNIGHHMGLTAYACI
GGKSTEEDIRRLESGVHIVSGTPGRVFDMIRRKSLRVNGLKTLVLDEADEMLGKGFKAQI
HDIYRMVPPLQIILVSATLPADVLEMTEKFMTEPASILVKRDEITVDSVKQYFVSVDEEK
NKFDVLMELYDSLTIAHAVVFCNTRKKVEQLAKKMTREKFTVTAMHGDMPQAERDEIMRQ
FRDGQSRVLITTDLWARGIDVERVSLVLNYDLPLAREQYIHRIGRTGRMGRTGLAITFVR
NDELRLLRDIEQFYATQIEELPANIGEQM
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaggtcgagcaagtggacaacatccaggcgaacgtgctggccattcccacgtttgag
gcgatggggctgaaggaggagctgctgaaaggcatgtacagcttcggttacaagcagccc
accgccattcaaaagcgcttcattatgccattcctaaagggccgcgacgtcatcgcacag
gcgtcctccggtacgggcaagacgtccgcgttctgtgtctgtctcctgcaagcgtgcgac
ccccacacgcgtgagacgcaggctctcattctctcgccgactcgagagctggccgtacag
acgcaggatctgtgcaacaacatcggccatcatatggggttgacggcgtacgcgtgcatt
ggtggcaaaagcacggaggaggacattcgccgcctagagagcggtgtgcacatagtctcc
ggcactcctggtcgcgtcttcgatatgatccgccgcaagagccttcgtgtgaacgggctg
aagaccctcgtgctggacgaggcagatgagatgctgggtaagggattcaaggctcagatc
catgacatctaccgcatggtcccacccctgcagatcattctcgtgtcggcgacgctgccg
gcggacgtgctggaaatgacggagaagttcatgacggagccggcgagcattctggtgaag
cgtgatgagatcaccgtggacagcgtgaagcagtactttgtctccgtcgacgaagagaaa
aataagttcgacgtcctcatggagttgtacgacagtctcacgatcgcccacgccgttgtc
ttttgcaatacacgcaaaaaggtggagcagctcgccaagaagatgacgcgtgagaagttc
acggtgaccgccatgcacggtgacatgccgcaggccgagcgtgacgagattatgcggcag
ttccgagacggtcagagtcgcgtgctcatcacaacggatctgtgggcacgtggcattgat
gtggagcgcgtctcactggtcctcaactacgacttgccgctcgcgcgtgagcagtatatt
caccgtattggtcgcactggtcgcatgggccgcacagggctggccatcacctttgtgcgc
aatgacgagctgcgcctactgcgcgatattgaacagttctacgcaacacagattgaggaa
ctccccgccaatatcggcgagcaaatgtaa

DBGET integrated database retrieval system