Leishmania sp. Namibia: 94186928
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Entry
94186928 CDS
T10410
Symbol
JIQ42_03241
Name
(RefSeq) hypothetical protein
KO
K12828
splicing factor 3B subunit 1
Organism
lein Leishmania sp. Namibia
Pathway
lein03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94186928 (JIQ42_03241)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lein03041
]
94186928 (JIQ42_03241)
03036 Chromosome and associated proteins [BR:
lein03036
]
94186928 (JIQ42_03241)
Spliceosome [BR:
lein03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
94186928 (JIQ42_03241)
Complex B
94186928 (JIQ42_03241)
Complex C
U2 SnRNP specific factors
94186928 (JIQ42_03241)
Chromosome and associated proteins [BR:
lein03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
94186928 (JIQ42_03241)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOR1L1_N
SF3b1
UME
PPP2R1A-like_HEAT
HEAT_2
RRP12_HEAT
Phage_head_chap
TRI4_N
DHO_dh
Motif
Other DBs
NCBI-GeneID:
94186928
NCBI-ProteinID:
XP_067708183
UniProt:
A0A836I7U4
LinkDB
All DBs
Position
28:1029657..1033031
Genome browser
AA seq
1124 aa
AA seq
DB search
MADSEEGEPQALKKHRWEDPTGFGAAGESGGMTPTATRWRSATPRQYGADTPRRTPVLSS
ETSTWRGMVTPNATPYMTDFIPTPTFGASGSSGMGGSTPSTFGTPRMGSTPLFASGSTPR
IGGATPLFTGATPAAGASFGATPNYQYEGETPLQSHFASSVETQSITTAAIEAKAKALEK
EWRRKNKRLTSEYLDSILPAEFFTVAAVPADYNPLPPEEPNFYEIAVRSMDVFALRAGAA
SAVTAGLDANGQPIRYDIPEDMGDGMPAMKVEDAAVFVELLKYHKAEKIPDEHLPSYLLM
KNLFKIKNGDTMQRRAGTRYLLDKATIFGSHFIFQRLSYIWSSDILNIEEKHYFIDFIKS
LLQQMGKEARRFTKEVIHLVEPLLTAHERILRDDGKQVLTLLTRVVGFQAVFAVIREDFG
HAESIVRRHTARVMAVVGYAAGTEEVTAALRDMSYAPSALARQTVVRSMAELAKMVGHAL
MAALPEMVAMLERLLRDEKRVQRDAALAVAAIAEATAPDGIEELAPLVDVICEECMKGIG
SMASPFIQAFGALVPLMSPFDAQARTAAMMPNLVNQFSTPEDEFRRVLISVVRKCVLAEG
VTPQFIHQTILEPFFEGFWRVRRLAAERQTSGSLVATTVEIAKKLGSVDVLVKLSPDMKD
ESEEYQRMVLTAIKKVVDATGMEAAPDTLVTFVLDGAIAAVRQDELGTSKLVMNVLATIC
NALAARLRPYLKQVFDLIKRRRENREASMRAQTADLVSRIAHTVMLADGAVFLQDLGLSL
YERLEDPDARALSANLRAVRSILAELGSRRFKPSVRELLKRLTFVIKSRNSQVQNGAIAL
IEDIATNYDTDVDAIHLHQLATRGLFELLDSPQRATRHACARTFGVIAKKIRPFAIILEL
VDNFRQDKRQIRICTAVALSAIAKECGPFTIIPYLLNEYKISEGKQVAVIVQHSVLKAIR
YIFEAIGPIGKEYVYPMIPLLERALTETNIQMRRMAVEAGRAVLLSVAGNDGFEEVALHL
LNFIHPNIVELLAKNEVKIGEERLKMVTAVVSYYEAARVVIEPGKLLQYLLQGLFHPARK
VRDIYRRTYNLIYVGSPESLVPYYPRVESDTSHTYVRHELEVLL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctgaagaaggagagccgcaggctcttaagaagcatcgctgggaggacccg
acaggcttcggcgccgccggcgaaagtggcggcatgacacccacggcgacgcgctggcgc
tcggctacaccgaggcagtatggtgccgacacgccgcgccgcacaccggtgctgtccagt
gagacatccacgtggcgcggcatggtgactccaaacgcaacgccgtacatgacggacttc
attcccacaccaaccttcggtgccagcgggagcagcggcatgggcggcagcacgccatcc
acgttcggcacaccacgcatgggcagcacccctctcttcgccagcggcagcaccccgcgc
ataggcggggccacccctctgttcaccggggcgaccccggcggccggtgcatcctttggc
gccaccccgaactaccagtacgagggcgagacaccgctgcagtcgcactttgcttcctct
gtcgagacgcagtccatcacgacggctgccatcgaggccaaggctaaggcgctggagaag
gagtggcgccgcaagaacaaacggctcacgagtgagtatttggacagcattctgcccgct
gagttcttcaccgttgcggcggtgccggccgactacaacccgttgccgccggaggagcca
aacttttacgagatcgccgtgcgctcgatggacgtgttcgcgttgcgggccggtgcggca
tcggcggtgaccgccggcctggacgcaaacgggcagcccatcaggtacgatatcccagag
gacatgggtgacggcatgcccgccatgaaggttgaggacgccgccgtcttcgtcgagctg
ctcaagtaccacaaggcggagaagattcctgatgagcatctcccctcttacctcctcatg
aagaatctcttcaagatcaagaacggcgacacgatgcagcgccgcgccggcacgcgctac
ctcctcgacaaggccacgatctttggcagccacttcatcttccagcgcctgagctatatc
tggagctctgatatcctcaacatcgaggagaagcattacttcatcgacttcatcaagtcg
ttgctgcagcagatgggcaaggaggcgcggcggttcaccaaggaggtgatccacctggtg
gagccgctgctcacggcgcacgagcgcattctgcgtgacgacggtaagcaggtgctgacc
ttgttgacacgggtggttgggtttcaggcggtgttcgcggtgattcgtgaggactttggc
cacgccgagagcattgtgcgtcgccacacggctcgtgtcatggcggtggtgggctacgcg
gccggcaccgaggaggtgacggcggcgctgcgcgacatgtcctacgccccgtcagcgctt
gctcgccagacggtggtacgctccatggcggagctggcgaagatggtgggccacgcgctg
atggcggcgcttccggagatggtggcgatgctggagcgcctgctgcgcgacgagaaacgt
gtgcagcgtgacgcggccctggcggtggcggcgatcgctgaggcgacggcgccggacggc
attgaggagctggcgccgctggtcgacgtcatctgcgaggagtgcatgaagggcatcggt
agcatggcgtcgcccttcatccaggctttcggcgcgctggtcccgctcatgtcccccttc
gacgcccaggcccgcacggcggcgatgatgccaaacctcgttaaccagtttagcacacca
gaagacgagttccgccgcgttctcatatctgtcgtgcgaaagtgtgtcttggcggagggg
gtgacgccacagttcattcaccagacaattttggagccgttcttcgagggcttctggcgt
gtgcgtcgcctcgccgcggagcgccagacatcaggcagccttgtggcgacgacggtcgag
attgcgaagaagctcggtagcgtggatgtgctcgtcaaattatcgccggatatgaaggat
gagagcgaggagtaccagcgcatggtgctgacagccatcaagaaggtcgtcgacgccacc
ggaatggaggctgcccccgacacgctcgtcaccttcgtcctcgacggcgccatcgccgct
gtgcgacaggatgagctcggcactagcaagttggtgatgaatgtgcttgcgacgatctgc
aacgcactagcagcgcggctgcggccgtacctgaagcaggtgttcgacctgatcaagcgg
cgccgcgagaaccgcgaggcctcgatgcgggcccaaacggctgacctcgtctcgcgcatc
gctcacactgtcatgctggcggacggcgccgtgtttctgcaggacctggggctgagcctg
tacgagcggctcgaggacccggacgcgcgggcgctgagcgcgaacttgcgcgcggtgcgc
tccatcttagccgagctgggctcccgccgcttcaagccctcagtgcgcgagctgctgaag
cggctcaccttcgtcatcaagagtcgcaacagtcaagtgcagaacggcgccattgccctg
attgaggatatcgccaccaactacgacacagatgtcgacgcgatccatctgcaccagttg
gccacccgtgggctcttcgagctgctggattccccgcagcgggcgacgcggcacgcgtgc
gcgcgcacctttggcgtgatcgccaagaagatccgcccctttgccattattctggagctg
gtcgacaacttccgccaggacaagcgccagattcgcatttgcactgccgtggccctaagc
gccattgcgaaggagtgcggcccctttaccatcatcccctacctactgaacgagtacaag
atcagcgagggaaagcaggtggcagtcattgtgcagcactcggtgctgaaggcaatccgt
tacatcttcgaggcgatcggcccgatcggcaaggagtacgtgtacccaatgataccgctg
ctggagagggccttgaccgagacgaacatacagatgcgacgcatggctgtggaggcaggc
cgcgctgttctgctttccgtggccggcaacgacggctttgaggaggtcgcgttgcacctg
ctgaactttatccacccaaacatcgtggagctactggcgaagaatgaggtcaaaatcggc
gaggagcgcctcaagatggtgacggcggtcgtgagctactacgaggcggcgcgggtggtg
atcgagcccgggaagctgctgcagtacctcctgcagggcctgttccacccagcgcgcaag
gtgcgcgacatctaccgccgcacttacaacctgatctacgtcggcagcccagaaagtctt
gtcccgtattacccgcgcgtagagagtgacacgtcgcacacgtacgtgcgccatgagctg
gaggttcttctctga
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