Leishmania sp. Namibia: 94187222
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Entry
94187222 CDS
T10410
Symbol
JIQ42_03545
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
lein Leishmania sp. Namibia
Pathway
lein03030
DNA replication
lein03410
Base excision repair
lein03420
Nucleotide excision repair
lein03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94187222 (JIQ42_03545)
03410 Base excision repair
94187222 (JIQ42_03545)
03420 Nucleotide excision repair
94187222 (JIQ42_03545)
03430 Mismatch repair
94187222 (JIQ42_03545)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lein03032
]
94187222 (JIQ42_03545)
03036 Chromosome and associated proteins [BR:
lein03036
]
94187222 (JIQ42_03545)
03400 DNA repair and recombination proteins [BR:
lein03400
]
94187222 (JIQ42_03545)
DNA replication proteins [BR:
lein03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
94187222 (JIQ42_03545)
DNA Replication Termination Factors
ELG1-RFC complex
94187222 (JIQ42_03545)
Chromosome and associated proteins [BR:
lein03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
94187222 (JIQ42_03545)
DNA repair and recombination proteins [BR:
lein03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
94187222 (JIQ42_03545)
Check point factors
HRAD17(Rad24)-RFC complex
94187222 (JIQ42_03545)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
RuvB_N
AAA_11
Rad17
AAA_22
AAA_lid_RFC1
AAA_16
SLFN-g3_helicase
ResIII
AAA_28
nSTAND_NTPase5
AAA_30
Mg_chelatase
AAA_5
ATPase_2
DUF815
AAA_19
T2SSE
Viral_helicase1
AAA_33
AAA_2
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
94187222
NCBI-ProteinID:
XP_067707485
LinkDB
All DBs
Position
30:complement(<987771..>988835)
Genome browser
AA seq
354 aa
AA seq
DB search
MRSSSQPAQKKAKTEGTADTAAAAAPWVEKYRPRTLAEVQAQDEAVSALRACLKEGTNMP
HFLFHGPPGTGKTTSILAVAHELFGPDYIRSRVRELNASDDRGISVVREKVKIFAQGAVS
STGSSVTQSDGKVYPVPPFKLIILDEADALLPDAQGALRRMMEDFSDVTRFCILCNYVSR
IIDPIASRCAKYRFKPLVKSALYQRIEYVAQAEGVTLSPSSLHALDAVSGGDLRLAIMHL
QSAQKANGNDLTKEDFVSVSGSVPADGMQRYISALLSHRLEEVIQASRRLVAEGFAASQV
LIQLQRYLVSTECPLNSAQRGRIMLKLCQTERRLADGADDYLQLLDIGSAVCSS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcctcgtcacaacctgcgcagaagaaggcgaagacggaggggacagccgacacc
gctgctgctgccgcgccgtgggtagagaagtatcggccacgcacgctggcagaggtacag
gcgcaggatgaggccgtcagtgccctccgcgcgtgcttaaaggagggaaccaacatgcct
cacttcctctttcatggtccacccggcaccggcaagacaacgtcgatcctcgcagtggca
cacgagctgtttggtcccgactacattcgtagtcgagtgcgcgagctgaacgcctccgat
gaccgcggtatcagcgtggttcgggagaaggtgaagatcttcgctcaaggcgccgtctca
agcactggcagcagcgtcacccagtcggacggaaaggtgtacccagtgccgcctttcaaa
ctgatcattctcgacgaagccgatgcgctgctccctgatgcgcaaggcgcactgcggcgc
atgatggaggacttcagtgacgtgacccgcttctgcatcctctgcaattatgtgagccgc
atcatcgatcctatagcgagccgatgcgccaagtatcgcttcaagccgcttgtaaagagc
gcgctttatcagcgcatcgagtacgtggcccaagccgagggcgtcaccctctcaccgtcg
tctcttcacgccttagatgccgtgagtggcggcgatctccgcctcgccattatgcacctc
cagtcggcccaaaaggcgaacggaaacgacttgacgaaagaagacttcgtctccgtctcg
ggcagcgtgccggcggacggaatgcagcgatacatcagcgcattgctctcgcatcgcttg
gaggaagtgatccaagcgtcgcgccggctggtggcggagggcttcgccgcctcgcaggtg
ctgattcagctgcagcgttatcttgtcagcactgagtgtccgctgaactcggcccagcgt
ggaaggatcatgctcaagctgtgccagacagagcggcgccttgccgatggcgcggatgac
tatctgcagctgctcgacattggaagtgctgtgtgctcttcatag
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