KEGG   Leishmania sp. Namibia: 94187683
Entry
94187683          CDS       T10410                                 
Symbol
JIQ42_04015
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
lein  Leishmania sp. Namibia
Pathway
lein03030  DNA replication
lein03410  Base excision repair
lein03420  Nucleotide excision repair
lein03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lein00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    94187683 (JIQ42_04015)
   03410 Base excision repair
    94187683 (JIQ42_04015)
   03420 Nucleotide excision repair
    94187683 (JIQ42_04015)
   03430 Mismatch repair
    94187683 (JIQ42_04015)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lein03032]
    94187683 (JIQ42_04015)
   03036 Chromosome and associated proteins [BR:lein03036]
    94187683 (JIQ42_04015)
   03400 DNA repair and recombination proteins [BR:lein03400]
    94187683 (JIQ42_04015)
DNA replication proteins [BR:lein03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    94187683 (JIQ42_04015)
  DNA Replication Termination Factors
   ELG1-RFC complex
    94187683 (JIQ42_04015)
Chromosome and associated proteins [BR:lein03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    94187683 (JIQ42_04015)
DNA repair and recombination proteins [BR:lein03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     94187683 (JIQ42_04015)
  Check point factors
   HRAD17(Rad24)-RFC complex
    94187683 (JIQ42_04015)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 Rad17 AAA_16 Mg_chelatase RCF1-5-like_lid AAA_assoc_2 RuvB_N AAA_19 AAA_24 AAA_30 AAA_11 nSTAND3 DNAX_ATPase_lid AAA_5 RNA_helicase AAA_18 DEAD AAA_25 AAA_14 SLFN-g3_helicase DUF434
Other DBs
NCBI-GeneID: 94187683
NCBI-ProteinID: XP_067708277
LinkDB
Position
27:240796..241878
AA seq 360 aa
MNTASTPWVEKYRPQTVSDIVGNTEAISRLQVIAREGNLPNLLLCGPPGTGKTTSMLCLA
RDLLLQSTDAASVGSSPGGAMKDILKEAVLELNASDDRGLDVVREKIKLFAQTKKTLPKK
YFSTGDGATKEEQVVHLHKIVLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSKI
IEPIQSRCAVVRFKKLSDADILKRLVYVIQQENVSYTDDGLEALLYLAEGDLRQALNALQ
ATHTGYGLVNADNVFKVCDQPHPVLVENIITACITKRNIEEAHKEMNRLLNRGYAPVDVI
STFFKVVQTNARLFRSELQQLEVLKIVGETTMRIAEGVGTSLQLAAMLARMINAVESASS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgaacaccgccagcacaccgtgggtggaaaagtaccgcccacagacggtgtcagacatt
gtcggtaataccgaggcgatttcgcgtttgcaggtgattgcgagggaaggcaatttgccc
aacttactcctttgtggacctcccggcaccggcaagaccacaagtatgctctgcctcgcg
cgcgatctgctgcttcagagcaccgacgccgctagtgtgggatcgtcgccgggtggagcc
atgaaggatatcctcaaggaagcggtgctggaactgaatgccagtgacgaccgcggattg
gacgttgtgcgcgagaagatcaagctcttcgcgcaaacgaaaaagacgctgcccaaaaag
tatttctccacaggcgatggggccaccaaagaggagcaggtggtgcacctgcacaaaatt
gtgctgctggatgaggcggatagcatgaccccagctgcgcagcaggccttgcgtcgcaca
atggaactgcacagcagcacgacgcggtttgcatttgcgtgcaacaacagtagtaagatc
atcgagcccattcagtctcgctgtgctgttgtacgctttaagaagctcagtgacgcagac
attttgaagcgactcgtgtacgtcatacagcaggaaaatgtctcctacaccgatgatggg
ctggaggcgctcctctatctcgccgagggcgacctgcggcaggcactaaatgcacttcag
gccacacacactggctacgggctcgtgaacgcagacaatgtcttcaaggtgtgcgaccag
ccgcatccggtgctcgtcgagaacatcatcacggcgtgcatcacgaagcgcaatattgaa
gaggcgcacaaggagatgaatcgactgctcaaccgaggctacgcgcctgtcgacgtgatt
tccaccttcttcaaagtggttcagacaaatgcccgtctttttcgcagtgagctgcagcag
ctggaggtgctcaaaatagtgggggaaacgacgatgcgcatcgcggaaggtgtgggcacc
tcgttacagctcgctgcgatgctcgcacggatgatcaacgcggtggagagcgcttcatca
tag

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