Leishmania sp. Namibia: 94187800
Help
Entry
94187800 CDS
T10410
Symbol
JIQ42_04135
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
lein Leishmania sp. Namibia
Pathway
lein03008
Ribosome biogenesis in eukaryotes
lein03013
Nucleocytoplasmic transport
lein03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
94187800 (JIQ42_04135)
03015 mRNA surveillance pathway
94187800 (JIQ42_04135)
03008 Ribosome biogenesis in eukaryotes
94187800 (JIQ42_04135)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lein03019
]
94187800 (JIQ42_04135)
03009 Ribosome biogenesis [BR:
lein03009
]
94187800 (JIQ42_04135)
Messenger RNA biogenesis [BR:
lein03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
94187800 (JIQ42_04135)
mRNA cycle factors
Stress granule specific factors
94187800 (JIQ42_04135)
Ribosome biogenesis [BR:
lein03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
94187800 (JIQ42_04135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2_MEX67
LRR_4
LRR_NXF1-5
LRR_9
zf-CCCH_2
zf-CCCH
zf_CCCH_4
LRR_8
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
94187800
NCBI-ProteinID:
XP_067708394
LinkDB
All DBs
Position
27:706767..708617
Genome browser
AA seq
616 aa
AA seq
DB search
MSRPYKTIKGAVGATKYNTPCKFFLRGSCSNQRCPYLHVRNQTSMRSASHKEVAVQQGNG
AVKVMSTMLKLFFEKQTQLIYNAESGMLNLSQLASYDDLSSVASSINFNTRTFCVALCTC
IRELVSPPPAILQLDKNDVKGFHHLGKALEEAGLHASLRALSLAHNNITSSDIAQELKHF
TGLTEVNLVGNPVTESTDYRLKFKRHVPWLQGLDGESMAAPPLELPWPRFFDPEHALADV
VSTADSLSSSVRGYDSTQKALLHFIQSALLNPLEMEPAPGLLTGVDAVSDIYALNATFTF
NLVSNEAAVSTPSRSAGGGAASRQRDVVREIVGFRMRQTESNHNVLLGLKSTTVAAGRTS
VCAKLEHVLYPKSFAVGHYIHDSPDVAVLDNKGFGPNAVVGMKQPLSVVTLHGVMLWRYR
TAGSDADVQHSNLVRDAIIIKRNFSRVITVSSTEPGRWHIVNDMVTLYPFRGGSSNESES
QASSAASCGAGVSTAPLTPENILLRDVHPYDVVFSPATDPKRAARIARRYRVPAPIVATL
CSVVHSDRELAVILVDLTDIPLEVYEQCATFVEMDPLASIFLCRIGNLFGIEPAEGAVLL
RKCGLDWAAIVQAVGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcccgtataagacgatcaaaggtgccgttggggcaaccaagtataacacgcca
tgcaagttcttcttgcgcggcagctgctccaatcagcgctgcccctacctgcacgtccgc
aaccagacctcgatgcggtcagccagtcataaggaggtggccgttcagcaggggaatggc
gctgtgaaggtgatgtcgacgatgctgaagttgtttttcgagaagcagacgcagctcatc
tacaacgcagaaagcggtatgctcaatctgtcccagctagcatcgtatgacgacctgtcc
tctgttgcctccagcatcaactttaacacgcgcaccttttgcgtcgcgttgtgcacgtgc
attcgcgagctggtctcgccgccgccggcgattctgcaactcgacaaaaatgacgtcaaa
ggcttccatcacctcggcaaggccctggaagaagcaggtcttcacgcgtctctgcgtgcc
ctgtcgctggcgcacaacaacatcacctccagcgacattgcacaggagctgaagcacttt
acgggcctgacagaggtgaaccttgtcggcaacccggtcacggagagcactgactacagg
ctgaaattcaaaaggcacgtgccgtggctgcagggtctagacggggaaagcatggcggcc
ccgccgctggagctgccatggccgagattcttcgaccccgagcacgcactggcggatgtg
gtcagtaccgctgacagcctctcctccagcgtgcgaggttacgacagcacgcaaaaggcg
ttgttgcacttcattcagtcagcgctactgaacccgctcgagatggagccggcccctggt
cttctaaccggcgtcgatgccgtgtcggacatctacgcgctcaacgccacctttaccttc
aacctggtgtcgaatgaggccgctgtctcgacgccaagtcggtcggctggcggcggcgct
gcctcgaggcagcgcgacgtggtgcgcgagattgtgggcttccgcatgcgccagacggag
agtaaccacaacgtgctgctcggtctcaagtcaacgaccgtagcagctggtcggaccagc
gtgtgcgccaagctagaacatgtgctgtatccaaagagctttgcggtgggccactacatt
catgatagccccgatgtggcggtgctggacaacaaagggttcggccccaacgccgtggtg
ggcatgaagcagccgctgtctgtcgttaccctgcacggggtaatgctttggcggtatcgc
accgccgggtcggacgccgacgtgcagcacagcaacctcgttcgcgatgccatcatcatc
aagcgcaacttctcgcgcgtgatcacggtgtcctcgacggagccgggccgctggcacatc
gtcaatgacatggtcacgctctacccctttcgcggcggcagcagcaatgaaagcgaatcg
caggcctcgagtgccgcgagctgtggcgcaggcgtgagcaccgctcccttgacaccagag
aacattctcctccgtgatgtccatccgtacgacgtggtctttagccctgccacggacccg
aagcgagcggcgcggattgcccggcggtaccgtgtgcctgcccccatcgtggccaccctg
tgctccgtcgtgcactcggacagggagttggccgtcatcttggtggacttgacggacatt
ccgctggaggtgtacgagcagtgcgccacgtttgtcgagatggacccgctcgcgagcatt
tttctgtgccgtatcggcaacctcttcggcatcgagccggcggaaggggccgtgttgctg
cgaaagtgcggcctggactgggctgccattgtgcaggcagtcggccggtaa
DBGET
integrated database retrieval system
