KEGG   Leishmania sp. Namibia: 94188197
Entry
94188197          CDS       T10410                                 
Symbol
JIQ42_04539
Name
(RefSeq) hypothetical protein
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
lein  Leishmania sp. Namibia
Pathway
lein03020  RNA polymerase
lein03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lein00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    94188197 (JIQ42_04539)
  09124 Replication and repair
   03420 Nucleotide excision repair
    94188197 (JIQ42_04539)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lein03021]
    94188197 (JIQ42_04539)
   03400 DNA repair and recombination proteins [BR:lein03400]
    94188197 (JIQ42_04539)
Transcription machinery [BR:lein03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     94188197 (JIQ42_04539)
  RNA polymerase III system
   RNA polymerase III
     94188197 (JIQ42_04539)
  RNA polymerase I system
   RNA polymerase I
     94188197 (JIQ42_04539)
DNA repair and recombination proteins [BR:lein03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      94188197 (JIQ42_04539)
SSDB
Motif
Pfam: RNA_pol_N Yippee-Mis18 UBA
Other DBs
NCBI-GeneID: 94188197
NCBI-ProteinID: XP_067708916
LinkDB
Position
25:complement(<556370..>556624)
AA seq 84 aa
MIIPVRCYSCGKVVGNLYEQYQRLLDQDYTEAEALDALHLDRYCCRRMILSHIDLIDDLI
PYSVPVTGTMQMMGPLQMSTPHRR
NT seq 255 nt   +upstreamnt  +downstreamnt
atgatcattccagtgcgctgctactcgtgcggcaaggtggttggcaatctctacgagcag
tatcagcggctattggatcaggactacacggaggccgaggcgctggatgcgctgcacttg
gatcgctattgctgtcgtcgcatgatcctctcccatattgatctcatagacgacctcatt
ccctatagcgtacctgtaacgggaacgatgcagatgatgggtccactgcagatgtcgacg
ccgcaccgccgctag

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