Leishmania sp. Namibia: 94188256
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Entry
94188256 CDS
T10410
Symbol
JIQ42_04598
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lein Leishmania sp. Namibia
Pathway
lein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
94188256 (JIQ42_04598)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lein03019
]
94188256 (JIQ42_04598)
Messenger RNA biogenesis [BR:
lein03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
94188256 (JIQ42_04598)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
94188256 (JIQ42_04598)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
94188256
NCBI-ProteinID:
XP_067708975
UniProt:
A0A836IQN3
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Position
25:complement(768777..770705)
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AA seq
642 aa
AA seq
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MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKSFMQNDDYKEKPKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALEKADSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQKSEYQVRLENLQTHFFKWESLLR
MVNNEELDTDEVDDLQEPIQKVLEDDVDLEVMEDMSIYDSFDIPEPKAKPVVPFDVSDYE
DKKAQSPKTAIKAKTPMSTLQAKASPFITSPKETGTSPAVAKGASPTPVSPSVLPPASTQ
APQKQQKSQQQPAAFSSLADNGEEETVPEWMDDDMDTANDDTFGDDAMSGGITIGSLAEM
ASATNKVAQDWGRPHKPIGPPEPKTVKLADHSYTSSEEKPKPTPPAAAPTLNAWERRAAE
QQSRIKAQQQPHASDAASSVAPSGPVAAAAEATVLEAVEPPLGHSAATTSSSTLAGSTHT
DPIQPFPPIPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAIPYFPQ
EVLPVLSNKDVYHHMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWYQRLER
PQTTTETEERGSYTFFDFEDKWDHDRVDDFLFEYKYLENELH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatcaagaaggtgcagacagaggcggaccgcctcctcaagaaggtaaatgag
ggcctcgacgcgtatgacgagctgcacgagaagctggctaacgcgcccaacgcaagtgca
aaggagcgcctcgagggcgatctcaagcgtgagctgaaaaagctgcagcgccaccgcgag
gccatgaaaagcttcatgcaaaatgacgactacaaggagaagccaaagatgcaagtctcg
cggaagaagattgaggagcgtatggagacgtttcgcgccatcgagcgcgaaatgaagacg
aaagccttcagtaacgagggattggcctccgccgcgctggagaaggcggactcggccacg
gaacagtggctgaaggacgcgattgaggagggccgaaaaaagatagagcttctggagtac
gaggtgcagaaggcgaacaacggccgcgtgcgccgtgggaagcagcagcagaagtccgag
taccaggtgcgcctcgagaacctgcagacgcatttcttcaagtgggagtcgctgctgcgt
atggtgaacaacgaggagctcgacaccgatgaggtggatgacctgcaggagccgattcaa
aaggtgctcgaggacgacgtcgatttggaggtgatggaagacatgtccatctacgatagc
ttcgacataccggagccaaaggcaaagcctgtcgtgccctttgacgtcagcgactacgag
gacaagaaagctcagtcgcccaagacggccatcaaggccaagacacccatgtccacgctg
caggcaaaggccagcccgttcatcacctctccgaaagaaacagggacgtcgccggccgtg
gccaagggtgcgtctcctaccccggtctccccgtcggtgctgccgccggcgtccacgcaa
gcgccgcagaagcagcagaagtcgcagcagcagcccgccgccttcagcagtctggcagac
aacggcgaggaagaaacagtgccggagtggatggatgacgacatggacaccgccaacgac
gacacctttggcgatgacgccatgagtggcggtatcacgatcggctcgctcgctgaaatg
gcctcggcgacaaacaaggtggcgcaagactgggggaggcctcataagcccatcgggccg
ccggagcccaagacggtgaagttggccgaccacagctacacttcatcggaggagaagccg
aagccgactccgcctgcagcggcgccgacgctgaacgcgtgggagcggcgcgccgccgag
cagcagagccgaataaaggcacagcagcagccgcacgcctccgatgccgcctcgtcggta
gcgccatccgggcccgtggctgcggccgccgaagcgactgtgctggaagcagtggaaccg
ccgctggggcactcagcggcgacgacgtcttcgtcgaccctggccggcagcactcacaca
gaccccatccaacccttcccgcccatccctggtgccgcccccggctccaagtttacgcct
aagaagattcacgagctcttggacatgtcgctcggtaacctgccgcacacgctcgacgtg
cagcggcagcgcccctacgagccgccaaacgcgatcgacgcgatcccgtacttcccgcag
gaggtgctgccggtgctgtccaacaaggatgtctaccatcacatggacctggacacgctg
ttcttcattttctattaccaccaaaagtcgtaccagcagtactttgccgccaaggagctc
aaagcccgctcctaccgctaccacacgaagcagcagcgatggtatcagcggctggagcgg
ccgcagacaacgacagagacggaggagcgcggctcctacacctttttcgactttgaagac
aagtgggaccacgaccgggtcgacgacttcctctttgaatacaaataccttgagaatgaa
ctccactga
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