Leishmania sp. Namibia: 94188417
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Entry
94188417 CDS
T10410
Symbol
JIQ42_04767
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
lein Leishmania sp. Namibia
Pathway
lein03030
DNA replication
lein03410
Base excision repair
lein03420
Nucleotide excision repair
lein03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94188417 (JIQ42_04767)
03410 Base excision repair
94188417 (JIQ42_04767)
03420 Nucleotide excision repair
94188417 (JIQ42_04767)
03430 Mismatch repair
94188417 (JIQ42_04767)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lein03032
]
94188417 (JIQ42_04767)
03400 DNA repair and recombination proteins [BR:
lein03400
]
94188417 (JIQ42_04767)
DNA replication proteins [BR:
lein03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
94188417 (JIQ42_04767)
DNA repair and recombination proteins [BR:
lein03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
94188417 (JIQ42_04767)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
Zeta_toxin
AAA_16
AAA_14
RuvB_N
AAA_5
AAA_22
AAA_28
nSTAND3
RNA_helicase
AAA_assoc_2
NPHP3_N
NTPase_1
AAA_18
AAA_7
AAA_17
AAA_6
PAP1
Motif
Other DBs
NCBI-GeneID:
94188417
NCBI-ProteinID:
XP_067709136
UniProt:
A0A836IR82
LinkDB
All DBs
Position
24:401580..403568
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AA seq
662 aa
AA seq
DB search
MPTLSASAAYAAHPITGHNELWSDKYKPRSIAEMCYPVCANKLKAWLENFTPVGSPGDDP
KKPHGVLLSGSPGVGKTTTVYVVARELGRTVVEYNASDFRSRKSLKENVSDLISNRAFSA
RATSYTDVILLMDEVDGCDIGGVGEVIEMLKSTRVPILCTCNDRWHPKLRALLNYVEDLR
FSHPPCNIVANYLCDRVLAREGISLSKPLLQDIIKNSGSDIRSMLNNLQLWCMNRVSLEQ
RQLAECAAQSTKDSDAGLFDAAEYFLLQGTSRGQRHSIAEMQACYYNADLIDMFVQENYL
HYNPQPVDGRDWMGAVSQAATSISRADAAQRIMYYEQNWSVSRFHVLCSSIAPCVYTRGK
YETFMTGQQKFFDMQRPVKFPTWLGHNSSANKNRRLLRCVTMQASHPTKGVSGNQEGVVA
DYMPHGWERPLTAPLVAKGKGGIDDVIAFMDQYNLMRDDWDLVQTLPHYKHMQSPSSMTP
SVSIATAVKSAFTREFNRRHRFGSFAKSALKRGDEETQDEEGEEEEGNPGSGADGRLNIA
KLVADGVKAVSGTGNGAAATKKKGKAAAGSAATSTTAAAKREPRAKRSTPTSEAARPSAK
RKTAMTSTRVVAKASVAKTAVRQKRARKASSESEEDSVSSSPSSSSSSASSSSSSSSTSH
SE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgctgtctgcatcggcggcttacgcagcgcaccccataacgggtcacaacgag
ctgtggtcagacaagtacaagccacgctccattgccgagatgtgctatccggtctgcgca
aacaagctaaaggcgtggctggagaacttcacaccggtcggcagccccggcgacgatccg
aagaagccgcatggcgtgctcctctccgggtctccgggtgtgggcaagacgacgacggtg
tacgtggtcgcgcgggagctcggccgcaccgttgtggagtacaacgcaagcgactttcgc
agccgcaagtcgctcaaggagaacgtgtcggacctcatcagcaaccgcgccttttcggca
cgcgccacgtcgtacaccgatgtgattctgctaatggacgaggtggacggctgcgatatt
ggcggtgtcggcgaggtcattgagatgctcaaatctactcgcgttccgatcctgtgcacg
tgcaacgatcgctggcaccccaagctgcgcgcgctgctcaactacgtggaggacttgcgc
ttcagtcatccgccgtgcaacatcgtggcgaactacctatgtgaccgtgttctggcgcgc
gagggcatttcgctctccaagccgctcctgcaggacattatcaagaactccggcagcgac
attcgcagcatgctcaacaacctgcagctctggtgcatgaaccgcgtctcacttgagcag
cggcagctggccgagtgtgccgcgcagtcgacaaaggacagcgatgccggcctcttcgat
gccgccgagtacttcttgctgcagggcacgtcgcgtgggcagcggcactccatcgccgaa
atgcaggcctgctactacaacgccgacctcatcgacatgtttgtgcaggagaactacctg
cactacaacccgcaaccggtggacgggcgggattggatgggagccgtctcgcaggccgcc
acgtcgatctctcgggcggacgcggcgcagcgcatcatgtattacgagcagaactggtcc
gtgtcccgctttcacgttctgtgctccagcattgccccgtgtgtgtacacgcgcggcaag
tacgaaaccttcatgacggggcagcagaagttcttcgacatgcaacggcctgtgaagttc
ccgacgtggcttgggcacaactcctccgcgaataagaaccgccgccttctacgctgtgtc
accatgcaggcgtctcacccgacgaagggtgtttcagggaatcaggagggcgtcgtcgcg
gactacatgccgcacggctgggagcgtccgctgaccgctccgctggtggcgaaaggtaag
ggcggcattgacgacgttatcgcctttatggatcagtacaaccttatgcgtgatgactgg
gacctcgtacaaacactgccgcactacaagcacatgcagtcgccgagctccatgacgccg
tcggtgagtattgccaccgccgtcaagagcgccttcacgcgtgagttcaacagaaggcac
cgctttggtagcttcgcaaagagcgcgctcaagcgcggtgatgaggagacgcaagacgag
gagggggaagaggaggaggggaatccggggagcggtgccgatggccgcctaaatatcgca
aagttggtcgcggacggtgtgaaggccgtgagcggcacaggtaatggcgctgcggccaca
aagaaaaaaggcaaagcggctgcgggatctgctgccacctccacgacagcagcagcgaaa
cgcgagccgcgggccaagaggagtactccgaccagcgaggctgccaggccatctgcaaag
aggaagaccgcgatgacctcaacgcgggtcgtggccaaggcatcggtggcgaagacagca
gtgaggcaaaagcgcgcgcgtaaggcatcctcagagagcgaggaggatagcgtatcgtca
tcaccgtcgtcctcgtcctcatctgcgtcctcctcgagcagcagcagctccacctcccac
agtgagtag
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integrated database retrieval system
