KEGG   Leishmania sp. Namibia: 94189968
Entry
94189968          CDS       T10410                                 
Symbol
JIQ42_06352
Name
(RefSeq) hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
lein  Leishmania sp. Namibia
Pathway
lein03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lein00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    94189968 (JIQ42_06352)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lein03019]
    94189968 (JIQ42_06352)
   03041 Spliceosome [BR:lein03041]
    94189968 (JIQ42_06352)
Messenger RNA biogenesis [BR:lein03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     94189968 (JIQ42_06352)
Spliceosome [BR:lein03041]
 Complex B
  Other components
   Prp19-related factors
    94189968 (JIQ42_06352)
 Complex C
    94189968 (JIQ42_06352)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_C Suf HAT_Syf1_M NRDE-2
Other DBs
NCBI-GeneID: 94189968
NCBI-ProteinID: XP_067709481
UniProt: A0A836L728
LinkDB
Position
23:748571..750955
AA seq 794 aa
MDSDPRVSALQWEVAKEASASPKTWAELARTTAAAAAADPVERANAVTLVYERAVRAFAS
SYKLWMAYIRYRQQETSRLCRPNEWFQSVREVYERALAELPKMPMLWVGYMEFVAASVVP
RVTMARHVLARALAGLPATQHHLMWKVAKGWCAMPVVPSATVQAVWRLYLSFQRSLHAKR
EYFQVLAQKGDFNVFLQECVHLGLPDTSNKGAVDERDLLLGDVSFWETVQTALQGKGWRF
TGDIGPLRRLIDLGKSRCASPVELSMAFAVFLYGQGHMREGRRELRRLLDEAPEAQTLTS
LYHLAVEVEDQLVESFAVDPNLKQLDDAAYNGVVQHLFGDGDPLSHLERLVREFPLLLNQ
AQLRNSPHNATLWLKRVELVQEDTYAGRSTFDDLVALYRQAIQQCTAGMSRVEGAAAQLF
SSYAQTLIRGGKLDSAILVLSEGTWCVPFTSAALNVQLLGLLVEAQLMSSSSPLSVRDAL
AVRLTSGARSGGSKRGRSGLLQSSAALPHVIHHPHAWIMWCDLCAAYDAVNAAAWRHLVE
ALASSSAFSAEAACYVAHKAFVCRQESMAVMMLERAVAATRQQPTAHLFVLEQYLSFLHV
RDGRKVPLHQFREVFSLVQQVTPVAIRTAPAAVIDLHVSCAYMEAAIGLYGTAVRMMQEI
SLVAIAALRGRDEHLRVLQAILEHSITFTEQRRGYDSVRTYCGALVQRLQHALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
AIRFGKRGSAKGPV
NT seq 2385 nt   +upstreamnt  +downstreamnt
atggacagtgacccgcgagtgagtgccctgcagtgggaggtagcgaaagaggcctcggct
tcgcccaagacatgggcagagctggcccgcaccaccgccgcggccgctgcggctgatccc
gtggagcgagcgaacgccgtaacgctggtctacgagcgcgccgtgcgtgcgttcgcctcc
tcctacaagctgtggatggcatacattcgctaccgccagcaggagaccagccggctttgc
cggccgaacgagtggttccagtctgtgcgtgaggtgtatgagcgggcgttagcggagctt
ccaaaaatgccgatgctgtgggtgggctacatggagtttgttgctgcctcggtagtgcca
cgtgtgacgatggcgcggcacgtactcgcgcgagcccttgcagggttgccggcaactcag
catcatcttatgtggaaagtcgcaaagggctggtgcgctatgcctgtcgtacccagcgct
acagtgcaagctgtttggaggctttacctgtcctttcagcgctcgctgcatgcgaagcgc
gagtactttcaggtgctcgcgcagaagggcgacttcaacgtgttcctgcaagagtgcgtg
cacctgggactgcccgatacgtcgaacaagggcgccgtcgacgagcgcgacctgctcctg
ggcgacgtgagcttttgggagactgtgcagacggcactgcaggggaagggctggcgcttc
acaggcgatatcggccctctgcgtcggttgatcgatcttggaaaatcgcggtgcgcttcc
ccagtcgagctttctatggcctttgccgttttcctttacggccaggggcacatgcgagag
ggccgaagagagctgcgtcggttgctagacgaggccccagaggctcagacgctgacttcg
ctctaccaccttgccgtggaggtggaggaccaactcgtggagtctttcgcggtggacccc
aatctcaagcagctcgacgacgccgcgtacaacggcgtggtgcagcacctcttcggtgac
ggcgacccgcttagccacctcgagcgtcttgtgcgcgagtttccgctgctcctcaaccag
gcgcagctacgcaatagcccgcacaatgcgacactgtggctgaagcgtgtagagctggtg
caggaggacacctatgcgggccgctccacctttgacgatctcgtcgctctgtatcgccag
gctattcagcagtgcactgcagggatgtcgcgtgtggaaggcgcagcggcgcagctattt
tcttcctatgcccagactctcattcgcggcggcaagctggacagcgccatcctggtgcta
agtgaggggacgtggtgtgtgcccttcaccagtgccgcgcttaacgtgcagcttcttggt
cttcttgtggaagcgcagctcatgtcgtcctcctcccccttgtccgtgcgggatgcgctg
gcggtgcgactgaccagtggcgctcgcagcggaggttcaaagcgcggccgaagcggacta
ctgcagtcgagtgcagccctgccccacgtgatacaccacccacatgcgtggatcatgtgg
tgtgacctttgcgctgcctacgacgccgtgaacgcggccgcttggcggcaccttgtcgag
gcgctcgccagctcgtccgccttctccgctgaggccgcctgctatgtagcccacaaggcc
tttgtttgtaggcaagagtcgatggctgtcatgatgctagagagagcggtcgctgccacg
cggcagcagcctaccgcgcatctgttcgtgcttgagcagtacctctccttcctgcacgtc
cgtgacggtcgaaaggtgcctctgcatcagtttcgtgaggtgttcagccttgtgcagcaa
gtgaccccggttgccatacgcactgcaccggcggccgtcatcgacctgcacgtcagctgt
gcttacatggaggcagcgatcggcctctacgggacagctgtccgcatgatgcaggagatt
tccctagttgctattgcagcgcttcgggggcgtgatgagcacctccgtgtcctgcaggcc
attcttgagcactctatcaccttcacggagcagcgcaggggctacgattcagtgcgcacc
tactgcggagcgctcgttcaacgactccagcacgcactcttgctgcagcgtgttgcgctt
cactgggctgctatcgagaagcgctctggcaacacggcacaggcgcatcttatcctcgac
gcttgcggggacagccaggatccgtccacggagcatggcgaggtgtactggcggctgtgg
gagtctctctgcacaagtgtggaggagtttgaaaaagtggctcggcgtcggcaacaagcg
gcgattcgcttcggcaaacgtgggagtgcgaaggggccggtgtaa

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