Leishmania sp. Ghana 2012 LV757: 94176728
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Entry
94176728 CDS
T10390
Symbol
GH5_01113
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03030
DNA replication
leis03410
Base excision repair
leis03420
Nucleotide excision repair
leis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94176728 (GH5_01113)
03410 Base excision repair
94176728 (GH5_01113)
03420 Nucleotide excision repair
94176728 (GH5_01113)
03430 Mismatch repair
94176728 (GH5_01113)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leis03032
]
94176728 (GH5_01113)
03036 Chromosome and associated proteins [BR:
leis03036
]
94176728 (GH5_01113)
03400 DNA repair and recombination proteins [BR:
leis03400
]
94176728 (GH5_01113)
DNA replication proteins [BR:
leis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
94176728 (GH5_01113)
DNA Replication Termination Factors
ELG1-RFC complex
94176728 (GH5_01113)
Chromosome and associated proteins [BR:
leis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
94176728 (GH5_01113)
DNA repair and recombination proteins [BR:
leis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
94176728 (GH5_01113)
Check point factors
HRAD17(Rad24)-RFC complex
94176728 (GH5_01113)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
Rad17
DNA_pol3_delta2
AAA_30
AAA_16
Mg_chelatase
AAA_19
AAA_22
AAA_11
AAA_5
TniB
nSTAND_NTPase5
AAA_14
AAA_24
ATPase_2
RuvB_N
DEAD
RCF1-5-like_lid
SLFN-g3_helicase
DUF815
AAA_assoc_2
AAA_2
NPHP3_N
nSTAND3
AAA_3
AAA_29
AAA_7
bpMoxR
AAA_lid_RFC1
DUF7465
Sigma54_activ_2
FtsK_SpoIIIE
TsaE
Sigma54_activat
AAA_28
ABC_tran
T2SSE
SRP54
RNA_helicase
AAA_25
AAA_33
nSTAND6
NB-ARC
AAA_23
Motif
Other DBs
NCBI-GeneID:
94176728
NCBI-ProteinID:
XP_067697353
LinkDB
All DBs
Position
35:complement(<1280405..>1281499)
Genome browser
AA seq
364 aa
AA seq
DB search
MYAGRQGDEAKAAASHLPWVEKYRPSTLESVVAHENILSTLRHLMDSGNMPHLLLYGPPG
TGKTTTIKACAHYLYGKDRVRANVLEMNASDDRGIDVVRHQTREFASTSSIFSMVGSSSS
VGSGSSGPAAKFKLVILDEADQMSHDAQAALRRVIEKYTRNVRFCILCNHINKIIPALQS
RCTRFRFAPVKKSAMMPRLRYVAEQEGVHYTADGLAAAFRLSHGDLRRCLNTMQSSALSA
DEITEESVYRVTGNPTPADVTAIVSDMLSSDFATGWIKVEETVMQKGISMADLTREIHPV
VMAMDLPQDCKCFLLMKLSDLEYYAAGGARESAGLGGLLGAFQLVKEAVTQRKPIRDVAE
GCAC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctggcaggcaaggggacgaggccaaggcggctgccagccatctgccatgggtt
gagaagtatcgccctagtacgctggagagtgtcgttgcgcatgagaatattctcagcacg
ttgcggcaccttatggacagcggtaacatgcctcacctactgctctacggtccgcctggt
actgggaagactaccaccatcaaggcttgtgcacactatctctacggtaaggatcgggtg
cgggcgaacgtgctcgagatgaacgcgtcggacgaccgcggtatagatgtggtgcgccat
caaactcgcgagttcgcgagcacatcttcgatattttccatggttggctccagcagctca
gttggcagcggtagcagcggcccggcggcaaagtttaagcttgtgatcctggacgaggcg
gatcagatgtcacacgatgcccaggcggctctgcgtcgcgttatcgagaagtacacgcgt
aacgtgcgcttttgcatcctgtgcaatcacatcaacaaaatcattcccgccttgcagtct
cggtgcactcgcttccgctttgcgccggtgaagaagtcggccatgatgccgcgcctgcgg
tacgtggcggagcaggagggtgtccactatacggccgacgggctggcggccgcgttccgc
ctcagccacggtgacttgcgccggtgcctcaacaccatgcagtcttccgccctgtccgcg
gacgagattacagaggagtccgtctaccgagtcactgggaacccgaccccagcagacgtg
acggcaatcgtatcggacatgctctccagcgacttcgcgacaggatggatcaaagtggag
gaaaccgtcatgcagaagggcatctccatggcagacctaacgcgcgaaattcaccccgtc
gtgatggccatggacttgccgcaggactgcaagtgctttttgctcatgaagctatccgac
ctggagtactacgcggcaggcggggcgcgcgagtcggccgggctcggtgggctgctgggg
gcctttcagctggtcaaggaggccgtgacgcagcgcaaaccgatcagggacgtcgccgag
ggctgcgcttgctga
DBGET
integrated database retrieval system
