Leishmania sp. Ghana 2012 LV757: 94176847
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Entry
94176847 CDS
T10390
Symbol
GH5_01239
Name
(RefSeq) hypothetical protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03030
DNA replication
leis03410
Base excision repair
leis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94176847 (GH5_01239)
03410 Base excision repair
94176847 (GH5_01239)
03420 Nucleotide excision repair
94176847 (GH5_01239)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leis03032
]
94176847 (GH5_01239)
03400 DNA repair and recombination proteins [BR:
leis03400
]
94176847 (GH5_01239)
Enzymes [BR:
leis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
94176847 (GH5_01239)
DNA replication proteins [BR:
leis03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
94176847 (GH5_01239)
DNA repair and recombination proteins [BR:
leis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
94176847 (GH5_01239)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POL2_thumb
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf_DPOE_2
zf-DPOE
YopE_N
Motif
Other DBs
NCBI-GeneID:
94176847
NCBI-ProteinID:
XP_067697472
LinkDB
All DBs
Position
35:<1802231..>1809139
Genome browser
AA seq
2302 aa
AA seq
DB search
MSTRLESGTREGWLFNYHPTTEVLEEEGAVTGEGAVRAALVLLFQDLAGDTFYVHLHYDP
YILVQAVEGHEREVELGLMSTFGPQIISEIVAVEREDLDLVNHLSGKKRVYLKVVFRNVQ
DLTTVRGRMEKIVKLNASLASENPLRSQFSGSLGDAMAKTFADDHLSSAAGSSRWMDWVQ
DMREYDVKYHMRVAIDMKVYCGLWYDVTVTDGEARVERCDDSRYAPAIPRVIAFDIETTK
APLRFPQPEVDEVYMISYMLDGRGYLIVNREIVTEDIAPFEYTPKPEYEGFFDTFNEENE
AATLRRFFDEMRKYKPNVYVTYNGDYFDFPFIHARALHHGMNMRKEIGFAQMADGAFLNQ
QIPHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSV
SDAVSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKK
EIERERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMKFDMNPDTYQCLMDDVDEALRFT
IEVENGVRVEEVTNLGEVREAVLAKLASLRDRPHQQERPFIYHLDVGAMYPNIILTNRLQ
PYAIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRIKAQLENESFAAGV
IEQANLAAVQKKAYGNRKGNVLEGTSYERKDDWKRGQSNRSGGGGAGYRNESRRQQREAA
DALLQREFGADNRGDGGNSDLDDDADGPKAYHKLNENTQFNMLKRRLSEYSRKAYGKIHE
TREVMRSNVVCQRENSFYVDTVRLFRDRRYEYKAALKKWKKKLDAAKDADERKMCQSRCV
QMESLQLAHKCILNSFYGYVMRKGSRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLEL
DTDGIWCCLPNTFPENFTFTTTNPSKPKISISYPCVVLNKMVHDRYTNHQYQNLVSTGVY
KMHSECSIYFEVDGPYLAMLLPASREEGKSIKKRYAVFNPDGSLAELKGFELKRRGELML
VKDFQSQVFRRFLDGSTLAEAYASAAVVADAALDMLESKGEGYDTEEILEKITESSNMTR
RLSEYPESQKSLAITTARRIAEFLGPQMVKDKGLACHFIISRMPTGRPVTERAIPVTIFR
ADPAVRTHFLRKWTADTTVPTELNLTTLLDWDYYAARFSACVQKIVSIPAALQSLPNPVP
RVAHPDWLEKRIRHSNSRYRQVSLLGMLSKVRGANEVLAGESWAAATDASTMREGEGEDV
LPVTQGAVAGAREEQLQDLEDVVGKEHSDMIRSAAKKTGRARAGEQRRATATAMEADWDE
DDADGEGESEDDVERMQREADATLDALAHDVKQRYFTPKSTAALDAAFFADLGTKRWLAQ
RKDAWLQRARLRKELALENGLGEVTLGGESGGAASLGLAAESDVARVNSHFIDLKSRALA
TVWNVLEVRENEESPGTVQVLAALEHSLYSFRVQVRRTVIVDADPALRLQGFDAAEVSGR
VLPRSAAAGRLYEVDIPPGEEGERRLNELHVMEGVRQIYEEHRSRVETFVEQLGCCVSVD
AARHLRNARRRPPSQRELFGIDEMNMHSYTNYLSRGAAERVVFIFHAVREQRGLIAVVYA
QTNAAFVVFIQPAEAARPTVNWSTVCEESAKRLHTSTSELIQVTSEVAVDQRAAWRQVHH
HLSAALESAKAPLLAVLQSCQLTSTLLQQRALPVGLPYLRVLGGTEDERLLSDPFRWARL
LARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVLYIRALHRRHHVLWCS
SDPLITFDTVEERPREVCMAGGYTSWCVEFGLSRLDVVALLFSQTIEEGDDPNARVLCDR
GVSTHFNILRDLVADVLGQAVDNILADTLLNNVARWLRDPASSCYEPRLVELLSSLAHRA
LTGILLRLAKLGGRTVKVDSSSVTVLTSKYSLQEAVSFARFITASLQDQPMLLLLSLQPV
RYWCPYIVLDPRDYAGLFVSAEDAVKLKVGEELTRSHLHVVHQLAMASRLPSRVRSTFLE
RVVEILYRLNEAVHRVYCDTVANHAVTLATRHDHLARRLLHDSQRLFEGDMQADIMDEVQ
RVTDTRDVYTEEEHAAHERGELTLWSSGAVGLEYAKCVCRVLELIPCNGAVGKVRNNCMR
LCGISPFSAQSQFQVDPFLEHRLQPVTCSFCNSYIAIDLLAKRKSTTWPFTCPVCAAPIS
AVAVEGTLVRHVSQLLRVYNQQDFVCAKCHEMTTTYVAERCCGALVGKGAPVVGELRALH
YLAKIQGFAWLAESVEAALLCS
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcggctggagagtgggaccagggaagggtggttgttcaactaccaccctacg
acggaggtgctggaggaggagggcgccgtcactggcgagggggcagtgcgtgcggcgctt
gtgctgctcttccaggaccttgctggcgataccttctacgtgcatcttcactacgacccg
tacatcctcgtccaggccgtcgagggtcacgagcgtgaggtggagctcggcctcatgtcc
acctttggcccacagatcatcagcgaaattgtcgccgtggaaagggaggatctcgacctc
gtgaatcacctgagtggcaagaagcgcgtctacctcaaggtcgttttccgcaacgtacag
gacctcacgacggtgcgcgggcgaatggagaagattgtcaagctcaacgcctctctcgcc
tccgagaacccgctccggagccagttcagcgggtcgctaggcgacgccatggcgaagacg
ttcgcggacgatcaccttagcagtgcagccggtagcagccggtggatggattgggtgcaa
gacatgcgcgagtacgacgtaaagtaccacatgcgcgtcgccatcgacatgaaagtgtac
tgcggcctctggtacgacgtgacggttacggacggggaggcgcgggtggagcggtgtgac
gacagtcgctacgcaccggccatcccgcgcgtcatcgccttcgacatcgaaacgacaaaa
gcccccctacgctttccgcagccggaggtggatgaggtgtacatgatatcgtacatgctg
gacggccgcggctacctgatcgtcaaccgcgagatcgttactgaggacatcgcgccgttc
gagtacaccccaaagcctgaatacgaagggtttttcgacaccttcaacgaagagaacgag
gcagcgacgctgcggcgcttctttgatgagatgcgcaagtacaagcccaacgtgtacgtc
acgtacaacggcgactactttgacttccccttcatccacgcccgtgcactgcaccacggg
atgaatatgcgcaaggagatcggattcgcgcagatggccgacggcgccttcttgaaccag
cagattccgcacctggattgcttctactgggtaaagcgtgactcttacctgccacagggc
agtcaaggcttgaaggcggtcaccaagtacaagctcggctacgagcctatcgaggtcgac
cccgaagacatgctccctctcgcgcagtcgcagccgcagcgcatggcctcgtactccgtg
tctgacgcggtgtcgacgtggtatctctatcaaaagtacgtgcatccgttcattttttcg
ctcgccacaattattccgatgccgccggacgatgtgctgcgcaagggctctggcggtttg
tgcgagtcgctgctaatggtacaggcggaggcaaacaacgtggtgtttcctaacaaaaag
gaaatcgagcgggagcggttctacgagggccatctcattgacacggagacgtacatcggc
ggccgtgttgaggctctgcgcagcggtgtgtaccgctctgatattccgatgaagttcgac
atgaatccggacacctaccagtgtctcatggacgacgtcgacgaggcgctacggttcact
atcgaggtggaaaatggcgtgagagtcgaagaggtgacgaatctgggagaggtaagggag
gccgtgctcgcaaagctggcgagtttgcgcgaccgaccgcaccagcaagagaggccgttc
atctatcacctcgacgtcggcgccatgtacccgaacatcatcctcaccaaccggctgcag
ccgtatgcgattgcgcggccagacgtgtgtgccgggtgctgcttcaactccccgaacaac
gaggcgcagtgcaagcgcgtcatgtcgtggaagtggagggctgagcttttcaccgccggc
cgctacgagtttcagcgaataaaggcacagctcgagaacgagtcgtttgctgctggcgtg
attgagcaggcgaacctcgccgccgtccagaaaaaggcgtacggcaaccgcaagggcaac
gtgctggagggtacctcgtacgagcggaaagacgactggaaaaggggccagagcaaccga
agcggcggcggcggtgccgggtaccggaatgagtcgcggcggcagcagcgcgaggccgcc
gacgcgcttcttcagcgcgagttcggcgccgacaatcgcggtgacggcggcaactccgac
ttggacgacgacgctgacggcccaaaggcgtaccacaaactgaacgagaacacgcagttt
aacatgctgaagcgtcggctcagcgaatacagccgaaaggcctacggcaagattcacgag
acgcgtgaagtgatgcggtcgaacgtggtgtgccagagggaaaactccttctacgtcgac
acagtccgcctctttcgcgaccggcgctacgagtacaaggctgcgctgaagaaatggaag
aagaaactggacgccgccaaggacgcggacgagcgcaaaatgtgccagagccggtgcgtg
cagatggaatcgctgcagctggcgcacaagtgcatcctcaactcgttttacggctacgtg
atgcggaagggttcgcgatggtcgagtatggagatggcgggcatcgtcacctacctcggc
gcgacgctgattcagatggcccgctcgcttgtccagcagatcggggtgacgctcgagctc
gacacggacgggatctggtgctgcctgcccaacaccttccccgagaatttcaccttcacc
actacgaacccatcgaaaccgaagatatccatatcgtacccgtgcgtcgtgctgaacaaa
atggtgcacgatcggtacacaaatcatcagtaccagaaccttgtcagcacaggcgtgtac
aagatgcacagcgagtgctcaatttactttgaagtcgatggcccgtacctcgccatgttg
ctgcctgctagtcgcgaggagggcaaaagcattaagaagcgctacgccgtcttcaacccg
gacggcagtttggcggagctcaaaggctttgagctgaagcgccgcggagagcttatgctt
gtcaaggacttccagtcgcaggtattccgtcgtttcctcgacggcagcacgctcgcggaa
gcctacgcctcggctgctgtcgtggctgacgctgcgcttgacatgctcgagtccaaaggc
gaaggctacgatacagaggaaattctggagaagattacggagagcagcaacatgacgcgg
cggctttccgagtatcccgagtcgcagaagtcgctggcaatcacgacggcacggcgcatt
gccgagtttcttggaccgcagatggtgaaagataagggcttggcgtgccacttcatcatc
tcccgcatgcccaccggccgccccgttacggagcgggctatccccgtcaccatcttccgc
gcggaccctgccgttcgcacgcacttcctgcgcaagtggaccgctgacacgacggtgccg
accgagctgaatttgacgacgctgctggactgggactactacgccgcgcgctttagcgcc
tgcgtgcagaagattgtgtctatcccggcggcgcttcagtcgctgccaaacccagtgccg
cgagtcgcgcatcccgactggctggagaagcgcatccgtcacagcaactctcgttaccgc
caagtctcacttctcgggatgctgtccaaggtacgtggtgcgaacgaggtgctggctgga
gagtcatgggcggcggcgaccgacgcctctacaatgcgagagggcgagggcgaagacgtc
cttccggtgacgcagggtgccgttgcaggcgcgagagaggagcagctgcaggacttggag
gacgtggtgggcaaggagcatagcgacatgatacgctccgcagcgaagaaaacaggcagg
gctcgagctggtgagcagcgacgtgctacggcgacggccatggaagcagactgggatgaa
gacgacgctgatggcgagggggagtcagaggacgacgtggagcgcatgcagcgcgaggcg
gatgccacgctggacgcgctcgcgcatgatgtgaagcagcgctacttcacacctaagagc
acggccgctctcgatgccgcgttttttgctgaccttggcactaagaggtggctggcgcag
cgcaaggacgcgtggctacagcgagctcgtctgcgcaaggagctggcgctcgaaaacggc
ctgggcgaggtcacactaggcggggaaagcggtggtgcggcgtcccttgggctagccgcg
gagtccgatgtggcgagggtgaacagccacttcatcgatctcaagtcacgcgcgctggca
accgtgtggaacgtgcttgaggtgcgcgagaatgaagagagccccgggaccgtgcaggtg
cttgcggcgctggagcatagcctgtactcctttcgcgtgcaggtgcgtcgcaccgtgatt
gttgatgctgaccctgcgctgcgcttgcaggggttcgacgccgctgaggtcagcggtcgc
gtactgcctcggagcgctgcagcaggccgcctctatgaggttgatattccgcctggcgag
gagggggagcggcgcctcaatgagctgcacgtgatggaaggtgttcgccagatttacgag
gagcatcgctcgcgcgtggaaacgtttgtcgagcagctcggttgctgcgtctccgtcgac
gcggcgcgccacctgcgcaacgcgcgccgtcgcccaccgtcgcagcgtgagcttttcggc
atagatgagatgaacatgcactcgtacacgaattacctcagccgtggtgctgcggagcgt
gtggtctttatctttcacgcggtgagagaacagcgcgggttgatcgctgtcgtttacgca
cagacgaacgctgcctttgtggtgttcattcagcccgcagaggccgcgaggcccacggtc
aactggagcaccgtttgtgaggagagcgcgaagcggctgcacacgagcacgtccgagctg
attcaggtcacatccgaggtggcggtggatcagcgggctgcgtggcggcaggtccatcac
cacctgagcgccgccctggagagcgccaaggcgcctctgctggcggtgctgcagagctgc
cagctcacgtcgacactcctacagcagcgcgcgttgcccgtggggctgccctacctgcgc
gtcctcggcggcaccgaggatgagcgactgctgagcgacccgttccgctgggcgcgtctt
ctggcgcggcgacttttcgagcgctttttcgcgtcgctgttgtgggtagaggagcgtttg
gcgctgagccgtgtctctggcatcccgctctgcaacattgcccaagacagctgcgtgcat
gtgctggatgttctgtacattcgtgccctgcatcggcgccaccacgtgctgtggtgcagc
agcgatcccctcatcacctttgacaccgtggaggagcgtccgcgcgaggtgtgcatggct
ggcggctatacctcgtggtgcgtcgagttcggcctttctcgcttggacgtcgtcgcgctt
cttttctcacagaccattgaggagggcgatgacccgaacgcgcgagtgctgtgtgaccgt
ggcgtatccacgcacttcaacatcctgcgtgatctggtagccgacgtactagggcaagct
gttgacaacatccttgccgacactctcctgaacaacgtggcgcgctggctgcgcgacccg
gcttcctcctgctacgagccgcgcttggtggagcttctcagcagccttgcgcaccgtgcg
ctcacgggcattctgctccgtcttgccaagcttggcggccgcaccgtgaaggtggacagc
agctccgtcaccgtcctcacttcaaagtactcactgcaggaagcggtgagctttgcacgc
ttcatcacggcgtcgctgcaagaccagccaatgcttctgctgctctccctgcagccggtg
cggtactggtgtccatacattgtgctcgaccctcgcgactacgccggcctgttcgtctcc
gccgaggatgcggtcaagctgaaggtgggcgaggagctgacccggtcgcatctgcacgtg
gtgcaccagctcgcgatggctagccgactacccagccgcgttcgcagcacctttctggag
cgcgttgtcgaaatcctctaccggctgaacgaagcagtacaccgtgtgtactgtgacaca
gtggccaaccacgcagtgacgctcgccacgcgacacgaccacctggcgcggcgcttgctg
cacgactcgcagaggctctttgagggtgacatgcaggcagacatcatggacgaggtccag
cgtgtgacagacacgcgtgacgtgtacaccgaggaagagcacgcggcacacgaacgcggc
gagctgacgctgtggtccagcggtgccgtcggactcgagtacgcaaagtgtgtgtgtcgt
gttctggagctgatcccgtgcaacggtgccgtaggtaaggtgcgcaacaattgcatgcgt
ctctgcggcatcagccccttctccgcccagtcgcagtttcaggtcgacccgtttctcgag
catcgccttcagcccgtcacgtgcagtttctgcaactcgtacatcgcgatcgacctgctg
gcaaagcggaagtcgacgacgtggccatttacgtgcccggtttgtgcggcgccgatctcg
gcagttgctgtggaggggacgctggtccgtcatgttagtcaactactgcgagtctacaac
cagcaggactttgtctgcgcaaagtgtcacgagatgacaaccacatacgttgccgaaagg
tgctgcggtgccctcgtcggtaagggggcacccgtcgtgggagagctccgggcactccat
taccttgcgaagattcaaggctttgcgtggctcgctgagagcgtggaggcggcgctccta
tgctcctga
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integrated database retrieval system
