Leishmania sp. Ghana 2012 LV757: 94177347
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Entry
94177347 CDS
T10390
Symbol
GH5_01786
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
94177347 (GH5_01786)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leis03021
]
94177347 (GH5_01786)
Enzymes [BR:
leis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
94177347 (GH5_01786)
Transcription machinery [BR:
leis03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
94177347 (GH5_01786)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
94177347
NCBI-ProteinID:
XP_067697618
LinkDB
All DBs
Position
34:223900..228666
Genome browser
AA seq
1588 aa
AA seq
DB search
MAQATTTVAQFVQPLLDKPVEVTSIKYGLLSDDAIHRLSVLPCHRVIGTEKNFGVNDSRL
GPSDRLSVCTTCGQRSIECTGHAGHIDLEVPVFHLGYFSAVIRACRTICKRCSNVLLTRE
EMEYYLRRLRSTAHEPQQRAAIVKGIQEDAYKTRVCLMCGGLNGTVRRVRPMRIVHEKYL
IDLRRGEQANEDPAAFFQGELRSAAMHNSEVGSHKEFVHEFLHPQRVKELFEAIPLEQVP
LLGLQPGTSPCSLLISTLLVPPVCVRPRGMSATNHIREDDLTTQYNEILICSDMMNDGTN
DAARSVETWELLQTRVARLLDAALPGFPSHLRTVECKSYAQRMKGKQGRFRGNLSGKRVD
FSGRSVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHLHPGALTVY
LSKECSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVL
PFRTFRFNECCCAPYNADFDGDEMNIHVVQTEEARAEAKELMLTSHNIITAKNGEPIIAC
TQDFLTAAYLVTARDALFDRASFAQMVSHWLGAETQYALPIPAILKPAELWTGKQLFELI
LRPTPETQLLLNLEAKARFYSGAGGHDDPAEGYVAFLDSVFLSGRLDKKLLGGGAKDGLF
ARLYALGGGEQTATCMSRIAQFTARHLQNYGFSLGLGDVSPTPSLNEKKAAVLAVSFNKC
DRLISLAKTGRLIPKPGMSVKQSLEAMLNAELSQVRDACGSAAVQALDAKSNAPLIMVNS
GSKGSALNTAQMMACVGQQTVSGKRIMNAFQDRALPHFPRFAEDPASRGFVANSFYSGLS
PTEFFFHSMAGREGIVDTAVKTAETGYIYRRLSKAMENLSVGYDASVRSVQGSIVQLRYG
EDGMDPWLMEGSHGTPLNLDQEWINNRAAYARFRKEMDAVMKAKSSNNGLAASADPLLST
YHKLYDEWHAVSMLPSELDAFVYCLLNADAATLASCAHLMEVEAAIRGAAPSSAASGVQL
LQQLARQHGSDRLRSDIQAFFRKKRDELVRLRQKLKLPLDDHITAADAAATATAKAALGG
AGHESVPHNDALPSLTAGTPASAAERRALAESLQAELLPLTKGMLLRFLEASARKVHRKL
CEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEVINANKNIATPVIT
APIILEDEFMSIDLAPARRTQHQAARAVKGLMERVLLKEITREMVEVVTPRQYYIQIFLD
MALIERLLLPIDAAVVCQRLYAAAARPMSPLRHLTEACVNVVSRDSLIVKPYEKDPMRVH
FNIQHLLTLLPELVVGGVPGVNRVMIAGRSEKLLAEGAELLSVMSLPYVDGVRTTCNHIA
VVERTLGIEAARETIVKEITSILQAYSLNIDIRHIYLLADVMTSRGVVLGITRYGIQKMN
NNVLTMASFERTTEHLYNAAMTEREDVNLSVSESIIIGKPIPLGTSSFNILLDKGSIAPP
GSNTGRMPSPHASANGAAITTVTSRSTGKMAAGKHSQKVVPTPKELFLRSSYMAYAAAYG
SGAHRRPRSGFSSQPLSAEGVFRLDLPL
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcgaccacgacggtggcgcagtttgtgcagccgctgcttgacaagccggtg
gaggtgacctcgatcaagtacggtctcctctctgacgacgcgatccaccgcctctcggtt
ctgccctgccaccgtgtgattgggaccgagaaaaacttcggtgtcaacgacagccgcctt
ggcccgagcgaccggttgtcggtgtgtaccacctgcggccagcgcagtatcgagtgcact
ggccacgccggccacatcgacctcgaggtgcccgtcttccatctcggctacttctctgcc
gtgattcgagcgtgccgcaccatctgcaagcgctgctccaacgtgcttcttacgcgtgag
gagatggagtattacctgcgccggctgcgatccacagcgcatgagccgcagcagcgcgcc
gccatcgtcaagggcattcaggaggacgcctacaaaacacgcgtgtgtctcatgtgcggc
gggctgaatgggacagtgcggcgggtgcggcccatgcgcattgtccacgaaaagtacctg
atcgatttgcgtcgcggcgagcaggcgaacgaggacccggccgcgttttttcaaggggag
cttcgctccgctgccatgcacaactcggaggtgggctcgcacaaggagtttgtgcacgag
tttctgcacccgcagcgggtgaaggaactgttcgaggcgattccgctggagcaggtgcct
ttgttaggcttacagcccggcaccagtccgtgcagccttctcatcagcaccttgctcgtc
ccgcccgtatgcgtgcggccgcgcggtatgtcggcgacgaaccacatccgtgaggatgac
ttgacgacgcagtacaacgagattctcatctgctctgacatgatgaacgatggcacgaac
gacgccgcacgcagtgtagaaacgtgggagctgctgcagacgcgtgtggcgcggctgttg
gatgcggcgctgccggggtttccttcgcatctccgcaccgtggagtgcaagtcttacgca
cagcgcatgaagggcaagcagggccgcttccgaggtaaccttagcggcaaacgcgtcgac
ttctctggacggtctgtcatttcacccgaccccaatcttcgcatcgacgagctcgccgtg
ccgctgcgcgtcgcgcgagtgctgacgtacccgcagcgtgtctttgcaggaaacattcag
ctcatgcgccggctcgtgcgcaacggcccgcacctgcaccccggcgccctcaccgtttac
ctctcgaaggagtgttcgcgcaagtcgctgcgcaacgcccgcgaccgcgaggccatcgcg
gcgcgcctcagcatcggcgacgttgtggagcggcatgtgatgaacggcgactacatcctc
ttcaaccgccagccgtcgctgcaccgcatttcgctcatggcgcaccgcgcgcgtgtgctg
cccttccgcacgtttcgtttcaacgagtgctgctgcgcgccgtacaacgctgacttcgac
ggcgacgagatgaacatccacgtcgtgcaaacagaagaagctcgcgcggaggcaaaggag
ctgatgctgacatcgcacaacatcatcaccgccaagaatggcgagcccatcatcgcctgc
acccaagactttctgaccgccgcctacctcgtgaccgcccgcgacgcccttttcgaccgc
gcgtccttcgcgcagatggtgtcccactggctcggcgccgagacgcagtacgcgctgccg
ataccggccatcctgaagccggcggagctgtggaccggcaagcagctcttcgagctcatc
cttcggccgacgcccgagacgcagctgctgctgaacttggaggcgaaggcgcgcttctac
tctggcgctggcgggcacgacgacccggcggaggggtacgtggcgttcctcgactctgtc
tttctctcgggtcgactcgacaagaagctgctgggcggcggcgccaaggacggactcttc
gcccgcctctacgccctgggcggaggggagcagacggcgacgtgcatgtcccgcatcgcg
cagttcaccgcccgccatcttcagaactatggcttttccctcggcctcggtgatgtgtcg
ccgacgccgtcgctcaacgaaaagaaggccgccgtgctcgccgtgtctttcaacaagtgc
gatcgcctcatctctctggccaagacgggccggctcatccccaagcctggtatgagcgtg
aagcagagcctggaggcaatgctgaacgcggagctgtcgcaggtgcgtgacgcgtgtggc
tcggccgctgtgcaggcgctggatgcgaagtcgaacgcgcctctaatcatggtgaactct
ggaagcaagggcagcgccctcaacactgcacagatgatggcgtgcgtggggcagcagacg
gtcagcggaaagcgcatcatgaatgccttccaggaccgcgccctaccgcacttcccgcgc
ttcgccgaggaccctgcgtcgcgcggctttgtggccaactccttctactctggcctgtcc
ccgacggagttcttcttccacagcatggctggtcgcgagggcatcgtggatacggccgtc
aagactgcagagacgggttacatctaccgccgcctcagcaaggccatggaaaacctgagc
gttggctatgacgcctcggtgcgcagcgtgcagggcagcattgtgcagctgcgctatggc
gaggatggcatggacccgtggctcatggaggggtcgcacggtacgccgctcaacctcgac
caggagtggatcaacaaccgagccgcctatgcccgctttcgaaaggaaatggacgccgtc
atgaaggcaaaaagcagcaataatgggctggctgcatcagcggacccgctgctctccacg
taccacaagctgtacgatgaatggcacgccgtgtcgatgctccctagcgagctggatgca
ttcgtgtattgtctgctaaacgcggatgcggcaacgctagcgtcctgtgcccacctgatg
gaagtagaggcggcgatccgcggtgccgcgccgtcgtccgctgcctccggcgtgcagttg
ttacagcagctcgcacggcagcacggaagcgaccgcctgcgcagcgacatccaggcgttc
ttccgcaagaagcgcgatgagctggtacggctgcggcagaagctgaagctgcccctggac
gaccatattactgcggctgatgcagcggcaacggccaccgccaaagcagctctcggcgga
gcagggcacgaatcagtcccacacaacgacgcgctaccctcgctcacggccggcacaccg
gccagcgccgctgaacggcgggcgctcgccgaatcgctgcaagccgagctgctgccgctc
acaaaaggaatgctgcttcgctttctcgaggcttcagcgcgcaaggtgcaccgcaagctt
tgcgagcccggcacgccgtgcggcgccattgccgctcagtctgtgggcgagcccagcacg
cagatgacgctccgcacgttccacttcgcaggggtggccagcatgagcattacgcagggt
gtgccacgcctcgtggaagttatcaatgcaaacaaaaacatcgccaccccagtcatcacg
gccccgattattctcgaggacgagttcatgtcgatagacctcgcgccagcacgccgcacg
caacaccaagccgctcgcgctgtgaagggcctgatggagcgggtgctcctgaaggaaatc
acacgcgaaatggtggaagtggtaacgccgcggcagtattacattcaaattttcctcgac
atggcgctgatcgagcgcctgctgctgccgattgatgcggcggtggtgtgccagcggctc
tacgcggcggccgcgcggccaatgtccccgctgcgtcacctcactgaggcgtgtgtcaac
gtcgttagtcgcgactccctcatcgtcaagccctacgagaaggacccgatgcgtgtgcac
ttcaacattcagcatctgttaaccctcttaccggagctcgtggtcggtggcgtgcccggc
gtcaaccgagtcatgattgccggccgctcggagaagttgctggcggagggggcagagctc
ttgtcggtcatgtcgctgccgtacgtggatggtgtgcgcaccacgtgcaaccacatcgcc
gtcgtggagcgcacgcttggtatagaggctgcccgagagactatcgtgaaggaaatcacg
agcatcctgcaggcctactcgctcaacatcgacatccggcacatctacctcctcgctgac
gtgatgacgagccgcggcgtggtgctcggcatcactcgatatggcatccagaagatgaac
aacaacgtcctcaccatggcgtctttcgagcgcaccaccgagcacctctacaatgcggcg
atgacagagagggaggacgtcaacctcagcgtctctgaaagcatcatcattggcaagccg
atccctctcggcaccagcagcttcaacatcctgctcgacaagggcagcatcgcgccaccc
ggctccaacacaggccgaatgccgtcgccccacgccagcgccaacggggcagccataaca
acagtgacctcgcggtccaccggcaagatggcggctggcaagcactctcagaaggtggtg
ccgacaccgaaggagctgttcctgcgcagctcttacatggcatacgccgccgcgtacggg
tcgggggcacatcgacgcccgcgcagcggcttttcgagtcagccgctctccgccgagggc
gtttttcggctggatctcccgctatga
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integrated database retrieval system