Leishmania sp. Ghana 2012 LV757: 94179516
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Entry
94179516 CDS
T10390
Symbol
GH5_04062
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03030
DNA replication
leis03420
Nucleotide excision repair
leis03430
Mismatch repair
leis03440
Homologous recombination
leis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94179516 (GH5_04062)
03420 Nucleotide excision repair
94179516 (GH5_04062)
03430 Mismatch repair
94179516 (GH5_04062)
03440 Homologous recombination
94179516 (GH5_04062)
03460 Fanconi anemia pathway
94179516 (GH5_04062)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leis03000
]
94179516 (GH5_04062)
03032 DNA replication proteins [BR:
leis03032
]
94179516 (GH5_04062)
03400 DNA repair and recombination proteins [BR:
leis03400
]
94179516 (GH5_04062)
Transcription factors [BR:
leis03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
94179516 (GH5_04062)
DNA replication proteins [BR:
leis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
94179516 (GH5_04062)
DNA repair and recombination proteins [BR:
leis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
94179516 (GH5_04062)
MMR (mismatch excision repair)
94179516 (GH5_04062)
DSBR (double strand breaks repair)
HR (homologous recombination)
94179516 (GH5_04062)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Zn_ribbon_TiaS
Zn_ribbon_15
Zn_ribbon_6
tRNA_anti_2
DZR
Motif
Other DBs
NCBI-GeneID:
94179516
NCBI-ProteinID:
XP_067699970
LinkDB
All DBs
Position
28:complement(760082..761485)
Genome browser
AA seq
467 aa
AA seq
DB search
MQQPGSHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAAIR
ATVFNDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTS
TAALPMQRYNFVPIELLKQREVGSLVDVLAVVLKVDEVSSITQKSTGRELVKRNVKMGDM
TAAVEVTFWNDEAKAWGYPVGTVVALRQLKVGSFDGVTLSSTYQTKIDVNPTDLPDVKKL
ATWYVSTGGANVTSLSSQGLGAAGGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVP
IYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWL
TLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETNSNAITGEE
SDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIEAYI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgggcagtcaccagatccagcccattgactccctcacaccatttctaggc
ggcaagtggtggattcgggcccgcgttacagacaagacggacatccgtacctggaacaag
ccgacgtcgcaggggaagcttttctccttcaccctcattgacgagtctgccgcgattcgg
gcgaccgtcttcaacgacgccgtcgacaccttcgagccgcttatcgtgaacgggcaggtg
tattacttcagcggtggtcaggtgaagaatgcgaaccggcgcttcagcaacgtgaacaat
gactacgagctcacgttcgaccgcagctcggagattatgcttgcgcggcaggacacatca
acagcggcgctgccgatgcagcgctacaactttgtgccgattgagcttctgaagcagcgc
gaggtcgggtcgctggtcgatgtgcttgccgtcgtgctcaaggtggatgaggtatcttcc
atcacgcagaagtccacgggtcgcgagctggtgaagcgaaatgtcaagatgggcgacatg
acggcggctgtggaggtgaccttttggaatgatgaggcgaaggcgtggggttatccggtc
ggcaccgttgtggcgctgcggcagctgaaggtcggcagtttcgacggcgtgactctctcg
tccacctatcagaccaagatcgacgtcaaccccaccgacctgcccgacgtcaagaagctg
gcgacatggtacgtgtcgactggcggcgcgaacgtgacgtcgttgtcgtcgcaggggctt
ggcgcggcaggcggcgccggtggcgagagcgaccgcggccgcaagtacctggacgagatc
cagtcggagggtattggcaggggcttgaagcccgagtacgtcgatgtgcgctgcgtcccc
atctacttcaagcaggacgcgcagtggtacgacgcatgcccgacatgcaacaagaaggtg
accgaggagggtgcgcagggagaccgcttccgctgcgagaaatgcgacaagaccgtcaca
ccgacgcagcgctacctcgtgtccatccaggtcacagacaacgtctctcaggcatggctg
acgctgtttaacgaagccggcatcgagttcttcggcatggaggcggcggagctgaagagg
cgcgcgcaggaggaccctctctacatcgcaaagctggcacagggccgcatgaaccggccg
gtggtgatgcgtctgcgcgtgaaggaggagacgaactcgaacgccattacaggcgaggag
tcggatcggctgcgcatgtcggtggtgcgcatctccgagttcatgccaatcgccggcacc
tccgaggagacgcggcgccgcctcgcgcagaacctgcgcacggagtgcgatgagattctt
cgcctcattgaggcttacatttga
DBGET
integrated database retrieval system
