Leishmania sp. Ghana 2012 LV757: 94179789
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Entry
94179789 CDS
T10390
Symbol
GH5_04350
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
94179789 (GH5_04350)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leis03400
]
94179789 (GH5_04350)
DNA repair and recombination proteins [BR:
leis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
94179789 (GH5_04350)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
SLX1_C
Motif
Other DBs
NCBI-GeneID:
94179789
NCBI-ProteinID:
XP_067700783
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All DBs
Position
25:complement(<604888..>606984)
Genome browser
AA seq
698 aa
AA seq
DB search
MDTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCC
VSGFTDDRAALKFEWCWQHPTASARLKHTIHFITGLRRLPYAVATLHLLVRASLFCQLDL
TLHIFEPALLQEATARAEVFLAARRGAVAVGGGLGADSPQAGTQQHSQRSASVQGRSDRS
ATPPPPALDSQGSAQDAPLPPALATIAVAPHVLPPLTPSLLFHVEVTTRQAFEDAHLSHD
RCLLLPSVGAGVDVREAGKGGGHAGAAAGTSCPYDVSLLSQAARAEWSRISFASGSDNES
TARPASCCHSAGSRTPSPQPVCSEALPALLGYRSEELAGDGAPDASPDSDVGDGAVSRSL
SSSPPPPMSSQRWASPPPLPPAINASTSLAGDASIGSVTAACPSFTAAAPAPLPRIPLRF
ADYCEVDFARAHAEEQQLLRHGLLPCSLCALPLQPPCVAYCSRAPFCALRCHLSCLAVWM
LYAEAEAAATVDGADTRPALLSQASPVPISPHRRLIPCQPCPCPLCGVLLHWGSIVKELK
KRVVVERRLQAAQRRLRMEKRWHARLDRIKPVKRSAGAVTQRRQRKGVIATAQSKIAGEV
PGAALTASPPTIHAGPALRDAPQACSLSSLGAPPSTSFAASLSCPSPRISSVASSPTVNT
SPIPRPGGAPTTPTAGAAVPEASFLSLTDFCEDDWLLP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcgcttccactgtgtgtatttgctgaccagcctcgatcctcagtgtgagggc
gacttttacataggctacaccgtgaatcccttgcgacggctgcggcagcacaatggcgag
ctcgttaacggtgcccgtcgcacgagtcgccgtggccgtccgtggacgattgtgtgctgc
gtctcgggcttcaccgacgatcgagctgcgctgaagttcgagtggtgctggcagcacccg
accgcatccgcgcggctgaagcatacaatccacttcatcacgggcctgcggcggctcccg
tatgcagtggctacgctgcaccttctggtgcgcgcctccctcttttgccagttagatctg
acgttgcacatcttcgagccggcacttttacaagaggcgacggccagggcggaggtgttc
ctggcggcgcgtcgaggcgcagtagccgtgggcggagggctgggagctgactcaccgcaa
gcgggcacccagcaacattcgcaaagaagcgcgtcggtgcaagggcgctcagacaggagt
gcaacaccgccgccgcccgcgctcgactctcaaggaagcgcgcaggatgctccgctgccg
ccggcactcgcaaccatcgcggtcgcccctcatgttctccccccgctcactccgtcgctc
ttgttccacgtagaggtgaccacgcggcaggccttcgaggacgcccacctgagtcacgac
cggtgcctactgctgccaagcgtgggcgcgggtgtagatgtgagagaggccgggaagggg
ggcggccacgcgggcgcggctgctggcacctcctgtccgtatgatgtctcgctgctgtcc
caagcggcgcgggcggagtggtcgcgcatttccttcgcctccggctcggacaatgagagc
acggcgcgacccgcctcctgctgtcactctgcaggatcgcgcacgccatctccgcagccg
gtttgctcagaggccttgccggctctcctaggctaccgcagcgaggagctcgcaggcgac
ggcgccccggatgcgagtccagacagcgatgtcggcgatggcgcggtgtcccgctctctc
tcctcttctccgccaccaccaatgtcttcgcagcgatgggcgtcgcctccacctctgcct
ccagccatcaacgcgtccacatcgcttgcaggggatgcgtccattggaagcgtcacggct
gcctgcccctcgttcacggcggcggcacccgccccactgccccgcatcccactgcgcttt
gcggactactgtgaggtggactttgcacgggcgcacgcagaggagcagcaactcctccgt
cacgggctgctgccgtgcagtctctgcgcgttgccgctgcagcccccgtgcgtagcgtac
tgcagccgggcacctttctgcgccttgcgctgccatctgagctgcttggcggtgtggatg
ctgtatgccgaggcagaggcggcagccactgtagacggcgcggacaccagacctgcgcta
ctttcgcaagcatctccggtgcccatatcaccgcaccgtcggctgatcccctgtcagcca
tgcccgtgccccctctgcggtgttctgctgcactggggctcgatcgtgaaggagctgaag
aagcgagtggtcgtggagcggcgcctacaggcggcacagcggcgcctccgtatggagaag
cggtggcacgcgcgcctggaccgcatcaagccggtgaagagaagcgccggcgcggtgacg
cagcgtcggcagcggaagggggtgatcgctacagcgcagtcgaaaattgccggagaggta
cccggcgctgctttgactgcatcaccgcctaccatccacgcggggccggcactgcgcgat
gcacctcaggcgtgttcactgagctctctgggcgcaccgccctcgacatcattcgcagcg
tctctctcctgcccctctcctcgcatctcgtcggtcgcgtcgtctcctacggtgaatacg
tcaccgatccctcgccccggtggcgcccccaccacccctactgctggtgcggcggtgcct
gaagcgtctttcttgtctctgacagacttctgcgaggatgactggctgctgccatga
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