Leishmania sp. Ghana 2012 LV757: 94180071
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Entry
94180071 CDS
T10390
Symbol
GH5_04643
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03008
Ribosome biogenesis in eukaryotes
leis03013
Nucleocytoplasmic transport
leis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
94180071 (GH5_04643)
03015 mRNA surveillance pathway
94180071 (GH5_04643)
03008 Ribosome biogenesis in eukaryotes
94180071 (GH5_04643)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leis03019
]
94180071 (GH5_04643)
03009 Ribosome biogenesis [BR:
leis03009
]
94180071 (GH5_04643)
Messenger RNA biogenesis [BR:
leis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
94180071 (GH5_04643)
mRNA cycle factors
Stress granule specific factors
94180071 (GH5_04643)
Ribosome biogenesis [BR:
leis03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
94180071 (GH5_04643)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2_MEX67
LRR_4
LRR_NXF1-5
LRR_9
LRR_8
zf_CCCH_4
zf-CCCH_2
zf-CCCH
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
94180071
NCBI-ProteinID:
XP_067700271
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Position
27:680652..682502
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AA seq
616 aa
AA seq
DB search
MSRPYKKSKGAVGATKYNTSCKFFLRGSCSNQRCPYLHVRNQTSIRSASHKEVAAQQGNG
AVKVMSTMLKLFFEKQTQLIYNAESGMLNLSQLASYDDLSSVASSINFNTRTFCVALCTC
IRELVSPPPAILQLDKNDVKGFHHLGKALEEAGLHASLRALSLAHNNITSSDIAQELKHF
TSLTEVNLVGNPVTESTDYRLKFKRHVPWLQGLDGESMAAPPLELPWPRFFDPEHVLADV
VSAADSFSSSVRGYDSTQKALLHFIQSALLNPLELEPAPGLLTGVDAVSDIYALNATFTF
SLVSNEAAVSTPSRSAGGGAASTQRDVVREIVGFRMRQTESNHNVLLGLKATTVAAGRTS
VCAKLEHVLYPKGFAVGHYIHDSPDVAVLDNKGFGPNAVVGMKQPLSVVTLHGVMLWRYR
TAGSDADVQHSNLVRDAIIIKRNFSRVITVSSTEPGRWHIVNDMVTLYPFRGGSSNESES
KASSAASGGAGVSTAPLTPENILLRDVHPYDVVFSPATDPKRAARIARRYRVPDPIVATL
CSVVHSDRELAVILVDLTDIPLEVYEQCATFVEMDPLASIFLCRIGNLFGIEPAEGAVLL
RKCGLDWAAIVQAVGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcccgtataagaagagcaaaggtgccgttggggcaaccaagtataacacgtca
tgcaagttcttcttgcgcggcagctgctccaatcagcgctgcccctacctgcacgtccgc
aaccagacctcgatacggtcggccagccataaggaggtggccgctcagcaggggaacggc
gctgtgaaggtgatgtcgacgatgctgaagctgtttttcgagaagcagacgcagctcatc
tacaacgcagaaagcggtatgctcaatctgtcccagctagcatcgtatgacgacctgtcc
tctgttgcctccagcatcaactttaacacgcgcaccttttgcgtcgcgttatgcacgtgc
attcgcgagctggtctcgccgccgccggcgattctgcagctcgacaaaaatgacgtcaaa
ggcttccaccacctcggcaaggccctggaagaagcaggtcttcacgcgtctctgcgtgcc
ctgtcgctggcgcacaacaacatcacctccagcgacattgcacaggagctgaagcacttt
acgagcctgacagaggtgaaccttgtcggcaacccggtcacggagagcactgactacagg
ctgaaattcaaaaggcacgtgccgtggctgcagggtctagacggggaaagcatggcggcc
ccgccgctggagctgccatggccgagattcttcgaccccgaacacgtactggcggatgtg
gtcagtgccgctgacagcttctcctccagcgtgcgaggttacgacagcacgcaaaaggcg
ttgctgcacttcattcagtccgcgctactgaacccgctcgagttggagccggctcctggt
ctgctgactggcgtcgatgccgtgtcggacatctacgcgctcaacgccacctttaccttc
agtctggtgtccaacgaggccgctgtctcgacgccaagtcggtcggctggcggcggcgct
gcctcgacgcagcgcgacgtggtgcgcgagattgtgggcttccgcatgcgccagactgag
agtaaccacaacgtgctgctcggtctcaaggcaacgaccgtagcagctggtcgaaccagc
gtgtgcgccaagctagagcacgtgctgtatccaaagggctttgcagtgggccactacatt
catgatagccccgatgtggcggtgctggacaacaaagggttcggccccaacgccgtggtg
ggcatgaagcagccgctatctgtcgttaccctgcacggggtaatgctttggcggtatcgc
accgccgggtcggacgccgacgtgcagcacagcaacctcgttcgcgatgccatcatcatc
aagcgcaacttctcgcgcgtgatcacggtgtcctcgacggagccgggccgctggcacatt
gtcaatgacatggtcacgctctacccctttcgcggcggcagcagcaatgaaagcgaatcg
aaggcctcgagtgctgcgagcggtggcgcaggcgtgagcaccgctcccttgacaccagag
aacattctcctccgtgatgtccatccgtacgacgtggtctttagccctgccacggacccg
aagcgagcggcgcgcattgcccggcggtaccgtgtgcctgaccccattgtggccaccctg
tgctccgtcgtgcactcagacagagaattggccgtcatcttggtggacttgacggacatt
ccgctggaggtgtacgagcagtgcgccacgttcgtcgagatggacccgctcgcgagcatt
tttctgtgccgtatcggcaacctcttcggcatcgagccggcggaaggggccgtgttgctg
cgaaagtgcggcctggactgggctgccattgtgcaggcagtcggccggtaa
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