Leishmania sp. Ghana 2012 LV757: 94180341
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Entry
94180341 CDS
T10390
Symbol
GH5_04929
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03022
Basal transcription factors
leis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
94180341 (GH5_04929)
09124 Replication and repair
03420 Nucleotide excision repair
94180341 (GH5_04929)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leis03021
]
94180341 (GH5_04929)
03400 DNA repair and recombination proteins [BR:
leis03400
]
94180341 (GH5_04929)
Transcription machinery [BR:
leis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
94180341 (GH5_04929)
DNA repair and recombination proteins [BR:
leis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
94180341 (GH5_04929)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
Motif
Other DBs
NCBI-GeneID:
94180341
NCBI-ProteinID:
XP_067701072
LinkDB
All DBs
Position
24:complement(<662981..>664312)
Genome browser
AA seq
443 aa
AA seq
DB search
MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPVLRLVERYLDSTPLASLGVVVMRDGISHR
LLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALAATAAKQPSS
SVSSRDPRAAWKGSATQLSVIVLTASVTLIDPTDVFAVVNLMAALSIRISVVSLVGAVHV
FEVCTVETGGTLYCPLNYDHFLHIMDDLATAHRSKLALAQRKRHQGGGHRQQVERPREEG
DDVQADNNDGNRADAPRLIPIGCPVYLEAPSPDSAGPSSAASSRSFYLACPQCHLIQLAV
PTTCPMCRLLLCSAPMLYSTFVSHNSLVPPAKLLRVMRDASVPTSVTSASNNAATAIMQE
DNIFQATAQQPIRCGLCMTSVLDEMIMGRTQHDGLGISSAAATLALDAAQVWQCSACASY
RCNACNDFVLHTIGLCPVCVALQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaccgtcctcctcctcgacggcagcgatgccatgaacagcagctcagactac
ctgcctaactatctgcttgccatgaggccaccagtgctgaggttggtggagcggtatctc
gactcgacgccactcgcatctcttggcgtggtggtgatgcgagacggcattagtcaccgc
ctgctgccgtgtaccacaaaccacaacgagatcgtcgacgtgctggagcgtgacgtcttc
ctgcacggcggctctggaaacacatccatggagaacgggctgcggatggccatgtcggag
ttagtagacatgcgcgaagtagcggccctggcggcaacggcggcaaagcagccgtcgtct
tcggtatccagtcgcgacccgcgcgcagcgtggaagggatcggcgacgcagctcagcgtc
attgtcttgacagcctctgtcacgctgattgatcctacagacgtcttcgccgttgtgaac
ctcatggctgccctgtccatccgcatcagtgtcgtctccctcgtcggtgccgtgcacgtc
tttgaggtgtgcaccgttgaaacgggtgggacgctgtattgccccctcaactacgatcac
tttctgcacatcatggacgacctggctacggcgcaccgctcgaagttggcgctggcgcaa
agaaaaaggcaccagggaggtggccaccggcagcaggtcgagcggcctcgtgaagagggt
gacgatgtccaagctgacaacaatgacggcaatcgtgctgatgcaccgcgccttatacca
atcggatgccccgtgtacctcgaggcaccatcgccggacagcgcaggaccgtcatctgct
gcatcatcacgctccttctacttagcttgcccccagtgtcatctcattcaactcgctgtc
cccacaacgtgtcccatgtgccgccttctgctgtgcagcgcgccgatgctgtacagcacg
tttgtgtcgcataactccctggtgccaccggcaaagttgctgcgcgtgatgcgggacgca
tcggtgccaacatcagtgacttccgcttcaaacaacgccgcaacggccatcatgcaagaa
gacaacatttttcaagcaacggcgcagcaaccgatacggtgtggcctctgcatgaccagc
gtcttggacgagatgatcatggggcgcacacaacatgacgggctcggcatctcctcagcg
gcggcgaccttggcattggatgcggcgcaggtgtggcagtgcagcgcgtgtgcctcgtac
cgctgcaacgcctgcaacgacttcgtcctccacaccatcggcctctgtcctgtttgtgtg
gcgctgcagtga
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