Leishmania sp. Ghana 2012 LV757: 94180882
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Entry
94180882 CDS
T10390
Symbol
GH5_05511
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94180882 (GH5_05511)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leis03019
]
94180882 (GH5_05511)
03041 Spliceosome [BR:
leis03041
]
94180882 (GH5_05511)
Messenger RNA biogenesis [BR:
leis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
94180882 (GH5_05511)
Spliceosome [BR:
leis03041
]
Complex B
Other components
Prp19-related factors
94180882 (GH5_05511)
Complex C
94180882 (GH5_05511)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
Suf
HAT_Syf1_M
NRDE-2
Motif
Other DBs
NCBI-GeneID:
94180882
NCBI-ProteinID:
XP_067701336
UniProt:
A0A836IVF3
LinkDB
All DBs
Position
23:818745..821129
Genome browser
AA seq
794 aa
AA seq
DB search
MDGDPRVSALQWEVAKEASTSPKTWAELARTTAAAAAADPVERANAVTLVYERAVRAFAS
SYKLWMAYIRYRQQETSRLCRPNEWFQSVREVYERALAELPKMPMLWVGYMEFVAASVVP
RVTMARHVLARALAELPATQHHLMWKVAKRWCAMPVVPSATVQAVWRLYLSFQRSLHAKR
EYFQVLAQKGDFNVFLQECVHLGLPDTSNKGAVDERDLLLGDVSFWETVQTALQGKGWRF
TGGIGPLRQLIDLGKSRCASPVELSMAFAVFLYGQGHMREGRRELRRLLDEAPEAQTLTS
LYHLAVEVEDQLVESFAVDPNLKQLDDAAYNGVVQHLFGDGDPLSHLERLVREFPLLLNQ
AQLRNSPHNATLWLKRVELVQEDTYAGRSTFDDLVALYRQAIQQCTAGMSRVEGAAAQLF
SSYAQTLIRGGKLDSAILVLSEGTWCVPFTSAALNVQLLGLLVEAQLMSSSSPLSVRDAL
AERLTSGTRSGGSKRGRSGLLQSSAALPHVIHHPHAWIMWCDLCVAYDAVNAAAWRHLVE
ALASSSAFSAEAACYVAHKAFVCRQESMAVMMLERAVAATRQQPTAHLFVLEQYLSFLHV
RDGRKVPLHQFREVFSLVQQVTPVAIRTTPAAVIDLHVSCAYMEAAIGLYGTAVRMMQEI
SLVAIAALRGRDEHLRVLQAILEHSITFTEQRRGYDSVRTYCGALVQRLQHALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
AIRFGKRGSAKGPV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacccgcgagtgagtgccctgcagtgggaggtagcgaaagaggcctcgact
tcgcccaagacgtgggcagagctggcccgcaccaccgccgcggccgctgcggctgatcct
gtggagcgagcgaacgccgtaacgctggtctacgagcgcgctgtgcgtgcgtttgcctcc
tcctacaagctgtggatggcatacattcgctaccgccagcaggagaccagccgactttgc
cggccgaacgagtggttccagtctgtgcgtgaggtgtatgagcgggcgttagcggagctt
ccaaaaatgccgatgctgtgggtgggctacatggaatttgttgctgcctcggtagtgcca
cgtgtgacgatggcgcggcacgtactcgcgcgtgcccttgcagagttgccggcaactcag
catcatcttatgtggaaagtcgcaaagcgctggtgcgctatgcctgtcgtacccagcgct
acagtgcaagctgtttggcggctttacctgtcctttcagcgctcgctgcatgctaagcgc
gagtactttcaggtgctcgcgcagaagggcgacttcaacgtgttcctgcaagagtgcgtg
cacctgggactgcccgatacgtcgaacaagggcgccgtcgacgagcgcgacctcctcctg
ggcgacgtgagcttttgggagacggtgcagacggcactgcaggggaaaggctggcgcttc
acaggcggtatcggccctctgcgtcagctgatcgatcttggaaaatcgcggtgcgcttcc
ccagtagagctctctatggcctttgccgttttcctttacggccaggggcacatgcgagag
ggccgaagagagctgcgtcggttgttagacgaggccccagaggctcagactctgacctca
ctctaccaccttgccgtggaggtggaggaccaactcgtggagtctttcgcggtggacccc
aatctcaagcagctcgacgacgccgcgtacaacggcgtggtgcagcacctcttcggtgac
ggcgacccgctcagccacctcgagcgtcttgtgcgcgagtttccgctgctcctcaaccag
gcgcagctacgcaatagcccacacaatgcgacactgtggctgaagcgtgtagagctggtg
caggaggacacctatgcgggccgctccacctttgacgatctcgtcgctctgtatcgccag
gctattcagcagtgcactgcagggatgtcgcgtgtggaaggcgcagcggcgcagctgttc
tcttcctatgcccagactctcattcgtggcggcaagctggacagcgccatcctggtgctc
agtgaggggacgtggtgtgtgcccttcaccagtgccgcgcttaacgtgcagcttcttggt
cttcttgtggaagcgcagctcatgtcgtcctcctcccccttgtccgtgcgggatgcgctg
gcggagcggctgaccagtggcactcgcagcggaggttcaaagcgcggccgaagcggacta
ctgcagtcgagtgcggccctgccccacgtgatacaccacccacatgcgtggataatgtgg
tgtgacctttgcgttgcctacgacgccgtgaacgcggccgcttggcggcaccttgtcgag
gcgcttgccagctcctccgccttctccgctgaggccgcctgctatgtagcccacaaggcc
tttgtttgtaggcaagagtcgatggctgtcatgatgctagagagagccgtcgctgccacg
cggcagcagcctaccgcgcatctgttcgtgcttgagcagtacctctccttcctgcacgtc
cgtgacggtcgaaaggtgcctctgcatcagtttcgtgaggtgttcagccttgtgcagcaa
gtgaccccggttgccatacgcactacaccggcagccgtcatcgacctgcacgtcagctgt
gcttacatggaggcagcgatcggcctctacgggacagccgtccgcatgatgcaggagatt
tccctagtcgctattgcagcgcttcgggggcgtgatgagcacctccgtgtcctgcaggcc
attcttgagcactctatcaccttcacggagcagcgcaggggctacgattcagtgcgcacc
tactgcggagcgctcgttcaacgactccagcacgcacttctgctgcagcgtgttgcgctt
cactgggctgccatcgagaagcgctctggcaacacggctcaggcgcatcttatcctcgac
gcttgcggggacagccaggacccgtccacggagcatggcgaggtgtactggcggctgtgg
gagtctctctgcacaagtgtggaggagtttgaaaaagtggctcggcgtcggcaacaagcg
gcgattcgcttcggcaagcgtgggagtgcgaaggggccggtctaa
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