KEGG   Leishmania sp. Ghana 2012 LV757: 94182514
Entry
94182514          CDS       T10390                                 
Symbol
GH5_07257
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
leis  Leishmania sp. Ghana 2012 LV757
Pathway
leis03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:leis00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    94182514 (GH5_07257)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:leis03021]
    94182514 (GH5_07257)
   03019 Messenger RNA biogenesis [BR:leis03019]
    94182514 (GH5_07257)
Transcription machinery [BR:leis03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     94182514 (GH5_07257)
Messenger RNA biogenesis [BR:leis03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     94182514 (GH5_07257)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 zf-CCCH_4 Torus zf-CCHC zf-CCCH_3 zf-CCCH_9 zf-CCHC_2 zf-C3H1
Other DBs
NCBI-GeneID: 94182514
NCBI-ProteinID: XP_067703436
UniProt: A0A836YIH6
LinkDB
Position
9:complement(365640..366644)
AA seq 334 aa
MFVDDAAGTHFDFEDTLPKEQPRTEKKLEICQDFQRGRCRFGDTCPQRHIISAYRTVQTK
VCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTRPNESLPECAA
YRRGFCPMGPSCRLRHVKRESACPYYLAGFCPLGPRCPLGHPIQERYDRDAVSKRILAKM
IVERADDPTFNRSATCYRAGCFDPGHLAPDCPGPQHSVLHKALGEIQEPGQPIGTLENGG
RGSGGASHRRCFLCDEEGHTMKDCPTNTHRNQHRSGGSGGPGAPQGNSGGAGIANRRRLR
REGGAGVGGGPSGGGGGTGFGGGGGRRRPGRDHG
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgttcgttgacgatgccgccggcacgcacttcgactttgaagacacgctgcccaaggag
cagccccgcacggagaagaagctagaaatctgccaagacttccagcgcggccgctgccgt
tttggcgacacctgcccccagcgccacatcatctcggcttatcgtaccgtgcagacgaag
gtatgcaagcactggctgcgtggtgcctgcgtgaacggggacaactgcctttaccttcac
gagtacgacaaccgctatgtcccgcagtgcgccttctttgagcgcgtgggcgagtgcacc
aacccggaatgccctttcctgcacacgagaccaaacgagtcgctgccagagtgcgccgca
taccgccgcggcttctgcccaatgggccccagctgccgccttcgacacgtgaagcgggaa
tcggcgtgcccatactacctcgctggcttctgcccgttaggcccgcgctgtccgctgggg
caccccatccaagagcgctacgaccgcgacgccgtctcgaagcgcatcctggccaaaatg
attgtggagcgcgccgatgacccaaccttcaaccgcagcgcaacctgctaccgagccggc
tgctttgaccctggccatctcgcgccggactgtccaggtccgcagcacagcgttttgcac
aaagctcttggcgagattcaagagccagggcaacccattggcactttggagaatggtggg
cgcggcagtggcggcgcctcgcatcgtcgctgcttcttgtgtgacgaagaggggcacacg
atgaaagactgtccgacaaatacgcaccgtaatcagcaccgcagtggagggagtggcggt
cctggcgccccacaaggcaatagcggtggagctggaatagctaaccgacggcgcctgcgg
cgagaaggcggtgccggcgttggaggcggccctagtggtggtggtggtggtactggcttc
ggtggcggaggcggtcgacgacgccccggtcgcgatcacggctaa

DBGET integrated database retrieval system