Leishmania sp. Ghana 2012 LV757: 94182514
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Entry
94182514 CDS
T10390
Symbol
GH5_07257
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
94182514 (GH5_07257)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leis03021
]
94182514 (GH5_07257)
03019 Messenger RNA biogenesis [BR:
leis03019
]
94182514 (GH5_07257)
Transcription machinery [BR:
leis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
94182514 (GH5_07257)
Messenger RNA biogenesis [BR:
leis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
94182514 (GH5_07257)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_9
zf-CCHC_2
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
94182514
NCBI-ProteinID:
XP_067703436
UniProt:
A0A836YIH6
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Position
9:complement(365640..366644)
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AA seq
334 aa
AA seq
DB search
MFVDDAAGTHFDFEDTLPKEQPRTEKKLEICQDFQRGRCRFGDTCPQRHIISAYRTVQTK
VCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTRPNESLPECAA
YRRGFCPMGPSCRLRHVKRESACPYYLAGFCPLGPRCPLGHPIQERYDRDAVSKRILAKM
IVERADDPTFNRSATCYRAGCFDPGHLAPDCPGPQHSVLHKALGEIQEPGQPIGTLENGG
RGSGGASHRRCFLCDEEGHTMKDCPTNTHRNQHRSGGSGGPGAPQGNSGGAGIANRRRLR
REGGAGVGGGPSGGGGGTGFGGGGGRRRPGRDHG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttgacgatgccgccggcacgcacttcgactttgaagacacgctgcccaaggag
cagccccgcacggagaagaagctagaaatctgccaagacttccagcgcggccgctgccgt
tttggcgacacctgcccccagcgccacatcatctcggcttatcgtaccgtgcagacgaag
gtatgcaagcactggctgcgtggtgcctgcgtgaacggggacaactgcctttaccttcac
gagtacgacaaccgctatgtcccgcagtgcgccttctttgagcgcgtgggcgagtgcacc
aacccggaatgccctttcctgcacacgagaccaaacgagtcgctgccagagtgcgccgca
taccgccgcggcttctgcccaatgggccccagctgccgccttcgacacgtgaagcgggaa
tcggcgtgcccatactacctcgctggcttctgcccgttaggcccgcgctgtccgctgggg
caccccatccaagagcgctacgaccgcgacgccgtctcgaagcgcatcctggccaaaatg
attgtggagcgcgccgatgacccaaccttcaaccgcagcgcaacctgctaccgagccggc
tgctttgaccctggccatctcgcgccggactgtccaggtccgcagcacagcgttttgcac
aaagctcttggcgagattcaagagccagggcaacccattggcactttggagaatggtggg
cgcggcagtggcggcgcctcgcatcgtcgctgcttcttgtgtgacgaagaggggcacacg
atgaaagactgtccgacaaatacgcaccgtaatcagcaccgcagtggagggagtggcggt
cctggcgccccacaaggcaatagcggtggagctggaatagctaaccgacggcgcctgcgg
cgagaaggcggtgccggcgttggaggcggccctagtggtggtggtggtggtactggcttc
ggtggcggaggcggtcgacgacgccccggtcgcgatcacggctaa
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