Leifsonia sp. ZF2019: IT072_08150
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Entry
IT072_08150 CDS
T10186
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leiz Leifsonia sp. ZF2019
Pathway
leiz03420
Nucleotide excision repair
leiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IT072_08150
03430 Mismatch repair
IT072_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leiz03400
]
IT072_08150
Enzymes [BR:
leiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT072_08150
DNA repair and recombination proteins [BR:
leiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IT072_08150
MMR (mismatch excision repair)
Other MMR factors
IT072_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
UAJ80959
UniProt:
A0A9E6XAT1
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All DBs
Position
1660055..1661803
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AA seq
582 aa
AA seq
DB search
MTDAPPTPAGLLAGLDAQQRVAAEALFGPVCILAGAGTGKTRAITHRIAYGVASGAFTPN
RVMALTFTNRAAAELRGRLRQLGAGGVAARTFHAAALAQLNYFWPQVVGGQLPSVLDGKG
RVLGHAAEKLSLRVDTATLRDIAAEIEWRKVSSLTLDQYADALASRPLPGTLTADQLVDM
HRTYEELKDERKQIDFEDVLLVCAGMIEVEPSVAMQVREQYRFFVVDEYQDVSPLQHQLL
GLWLGDRRDLCVVGDASQTIYSFAGARSEYLLGFEREHPGATVVRLEQNYRSTPGVIETA
NRLMRGRSGALTLHAAAAQRGRDGAPTGDVAPPAAFDDDRAEARAVAEGIAAEIAAGARP
ESIAVLYRVNVQAALLEQALGDLGISYQIRGSKRFFDLPEVRQAIMTLRAASVAATDEPV
FKSVSDVLRTLGWSVQPPSGRGAVRERWESLNAIMGLVDEMPAGTTFRRFTDELLARQAG
QHEPTLAAVTLATLHAAKGLEWESVYLIGLSEGLVPISYATGFEQIDEERRLLYVGITRA
RRRLRLSWSHRGSQPGRPVVRQPSRFLAELAPPARQQGTSDD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacgctccacccaccccggcggggctgttagcggggctcgacgcccagcagcgc
gtcgccgcggaggctctgttcggcccggtctgcatcctcgcgggtgcgggcaccgggaag
acccgcgcgatcacccatcggatcgcctacggcgtggcctccggggcattcacccccaac
cgcgtgatggcgctgaccttcaccaaccgcgccgccgcggaactgcgtggccgcctgcgt
cagctcggcgccgggggagtcgccgcgcgcacgttccacgccgccgcactggcgcagctg
aactacttctggccgcaggtggtgggcgggcagctgcccagcgtcctcgacggtaagggc
cgtgtgctcgggcacgcggccgagaagctgtcgttgcgggtcgacaccgcgacgctgcgc
gacatcgcggcggagatcgagtggcgcaaggtgtcgagcctgacgctcgaccagtacgcg
gacgcgctcgcgtcgcgcccgctgccgggcacgctcacggccgatcagctcgtcgacatg
catcgcacgtacgaggagctgaaggacgagcgcaagcagatcgacttcgaggacgtcctg
ctggtgtgcgcagggatgatcgaggtcgagccgtccgtcgcgatgcaggtccgcgagcaa
taccgcttcttcgtcgtcgacgagtaccaggacgtgtcgccactgcagcatcagctgctc
gggctctggctcggcgatcgccgcgacctctgcgtggtcggcgacgccagccagaccatc
tactccttcgccggtgcgcggagcgagtacctgctcgggttcgagcgcgagcaccccgga
gcgacggtggtgcggctcgagcagaactaccgttcgacgcccggtgtgatcgagaccgcc
aaccggctgatgcgcgggcgctccggggcgctcaccctgcacgccgccgcggcacagcgc
ggccgcgacggagcgcccaccggcgatgtcgccccacccgccgcgttcgacgacgaccgt
gccgaggcgcgcgcggtcgccgaggggatcgcggccgagatcgccgcgggtgcgagaccc
gagagcatcgccgtgctgtatcgggtcaacgtccaggcagccctgctcgagcaggcgctc
ggcgatctcgggatcagctaccagatccgcgggtccaagcggttcttcgatctgccggag
gtgcggcaggcgatcatgactctgcgcgccgccagcgtcgccgcgaccgacgaacccgtt
ttcaagtccgtcagcgatgtgctgcgcacgctcggctggtcggtgcagccgccgtccggc
cgaggagcggtgcgcgagcggtgggagtcgctgaacgcgatcatgggcctcgtggacgag
atgccggccggcacgaccttccgccgcttcacggacgagctgctcgcccgccaggccggt
cagcacgagccgacgctcgccgccgtcacgctcgcgacgctgcacgccgcgaaaggtctc
gagtgggagtcggtctatctgatcggattgagcgaaggactcgtccccatcagctacgcc
accggcttcgagcagatcgacgaagagcgtcgcctgctctatgtcggcataacgcgtgcc
cgccgccgtctgcggctcagctggtcgcatcgaggctcccagccgggacgtccggtcgtc
cggcagccgtcgcgcttcctcgccgaactggccccgccggcgcgtcagcagggcacatcg
gacgactga
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