Leifsonia sp. ZF2019: IT072_12075
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Entry
IT072_12075 CDS
T10186
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
leiz Leifsonia sp. ZF2019
Pathway
leiz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
leiz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IT072_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leiz03021
]
IT072_12075
Transcription machinery [BR:
leiz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IT072_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
BUD22
Motif
Other DBs
NCBI-ProteinID:
UAJ78021
LinkDB
All DBs
Position
complement(2481300..2482634)
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AA seq
444 aa
AA seq
DB search
MATRAATKAPEADTVEETVAGAEGATAVKAATKKTTKTAAAKPAAKKGASKPKGRAAGED
DDEEVDDDAEVEIDAEDSDDDTDAATGDSDDADDSDDADAPQKAADVAAAAVAAAPLPTD
ALVLRAVDEDDDIPVYSTTITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAE
DKLANTQGMTKELERELKWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEG
NLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQR
QMLQDLGREPTPEELSKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEA
VVPADAVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRERIR
QIESKTMAKLRHPSRSQSLRDYLE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgtgcagcaacgaaggccccggaggccgacacggtcgaggagacggtggcg
ggcgccgagggcgcgacggcggtcaaggccgccacgaagaagacgacgaagaccgctgct
gcgaagccggcggccaagaagggtgcgagcaagcccaaggggcgtgcggccggcgaggac
gacgacgaggaggtcgacgacgacgccgaggtcgagatcgacgccgaggactcggacgac
gacacggatgccgcgaccggcgattcggacgacgcggatgactccgacgacgccgacgca
ccgcagaaggcggccgacgtcgccgcggcggccgtcgcggccgccccgctgccgaccgat
gcgctggtgctgcgcgcggtcgacgaggacgacgacatcccggtctactcgacgaccatc
accggcgcgacggccgacccggtcaaggactacctcaagcagatcggcaaggtcccactg
ctgaacgcggcggaggaggtcgagctcgcgatgcgtatcgaggccggcctgttcgccgag
gacaagctcgccaacacgcagggcatgaccaaggagctggagcgcgagctcaagtgggtc
gcgcgggacggacagcgcgccaagagccacctgctcggcgccaacctgcgcctcgtggtc
agcctcgccaagcgctacaccggccgcggcatgcagttcctggacctgatccaggagggc
aacctcggtctcatccgcgccgtcgagaagttcgactacaccaagggcttcaagttctcc
acgtacgcgacctggtggatccgccaggcgatcacgcgcgcgatggcggaccaggcccgc
accatccgcatcccggtgcacatggtcgaggtcatcaacaagctcgcccgcgtgcagcgc
cagatgctgcaggacctgggccgcgagcccacccccgaggagctgtcgaaggaactcgac
atgacccccgagaaggtcatcgaggtgcagaagtacggtcgcgagccgatctcgctgcac
accccgctcggcgaggacggcgacagtgagttcggcgacctgatcgaggacaccgaggcg
gtcgtcccggcggacgcggtgggcttcaccatgctgcagaagcagctggagagcctgctc
gactcgctctcggagcgtgaagcgggcgtgatccgcatgcgcttcggcctgggcgacggc
atgccgaagacgctcgaccagatcggcgacaccttcggcgtgacgcgcgagcgcatccgc
cagatcgagtcgaagacgatggcgaagctgcgccacccgtcacgctcgcagtcgctgcgc
gactacctcgagtaa
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