Leifsonia sp. ZF2019: IT072_12670
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Entry
IT072_12670 CDS
T10186
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
leiz Leifsonia sp. ZF2019
Brite
KEGG Orthology (KO) [BR:
leiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leiz03032
]
IT072_12670
03400 DNA repair and recombination proteins [BR:
leiz03400
]
IT072_12670
Enzymes [BR:
leiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IT072_12670
DNA replication proteins [BR:
leiz03032
]
Prokaryotic type
DNA Topoisomerases
IT072_12670
DNA repair and recombination proteins [BR:
leiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IT072_12670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
UAJ78129
UniProt:
A0A9E7BID7
LinkDB
All DBs
Position
complement(2604358..2605326)
Genome browser
AA seq
322 aa
AA seq
DB search
MTRLRRSDPSGPGYHRRPSAKGPVYEDEAGNPVVDERELERIRSLVIPPAWEDVWISPDA
RGHIQAAGTDQAGRRQYRYHDAWRLHQDRIKFERAAQLAETLPGARRKVTMDLRAEGFTR
DRVLAAAFRIIDLGSVRIGSEEYLHANGSRGLTTLLCRHARIDGDEITLTFPAKSAQKWT
STLVDADLAELLTQIQALRGQRSRLLSWKDGTWHSIRPASLNEYIRRHTGGEFTAKDFRT
LHGTIVAAEALAAFGTSTTESRRKKRVTAAVNEAAAALGNTPAIARNSYIDPRVFDRYRQ
GEVIDTSGGRVPEPALLELLAG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcctgcgccgctccgacccctcggggccgggataccaccgtcgcccgagcgcg
aagggccccgtctacgaggacgaggccggcaacccggtcgtcgacgagcgcgagctggag
cgcatccgctcgctcgtcatcccgccggcgtgggaggacgtctggatctcgccggatgcc
cgcggccacatccaggccgccggcacggaccaggccggccggcggcagtaccggtaccac
gacgcctggcgactgcaccaggatcgcatcaagttcgagcgcgccgctcagctggccgag
acccttcccggggcacgccgcaaggtgacgatggaccttcgcgcggagggattcacccgt
gaccgcgtcctcgccgccgcgttccgcatcatcgacctcggcagcgtgcgcatcggcagc
gaggaatacctccacgccaacggcagccgcggcctcaccaccctgctctgccgccacgcc
cgcatcgacggagacgaaatcaccctcaccttcccggcgaagtccgcccagaagtggacg
agcacgctcgtcgacgccgatctcgccgagctgctcacccagatccaggcgctccgcggt
cagcgctcccgcctgctctcgtggaaggacggcacctggcactcgatccgtcccgcctcc
ctcaacgagtacatccgacgccacaccggcggggagttcaccgccaaggacttccgcacc
ctccacggcaccatcgtcgcggcggaggcgctcgccgcgttcgggacgagcacgacggaa
tcgcgccgcaagaagcgcgtcaccgccgcggtcaacgaggccgccgccgcgctgggaaac
acccccgcgatcgcgcgcaacagctacatcgacccgcgcgtgttcgaccgctaccgccag
ggcgaggtcatcgacacgtccggtgggcgggtgccggaaccggcgctgctggagctactc
gcgggctga
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