Leifsonia sp. ZF2019: IT072_14930
Help
Entry
IT072_14930 CDS
T10186
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
leiz Leifsonia sp. ZF2019
Pathway
leiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
leiz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IT072_14930
09124 Replication and repair
03420 Nucleotide excision repair
IT072_14930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leiz03021
]
IT072_14930
03400 DNA repair and recombination proteins [BR:
leiz03400
]
IT072_14930
Enzymes [BR:
leiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT072_14930
Transcription machinery [BR:
leiz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IT072_14930
DNA repair and recombination proteins [BR:
leiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IT072_14930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
UAJ78533
LinkDB
All DBs
Position
3047079..3048722
Genome browser
AA seq
547 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVAHPAAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAG
HTADDMLATLERYSKFPIPQTVSVDVAETVARYGRLVIERDDEGELVLRSADLAVLTEVA
SAKRIAPLLLERRDDTTFAVQAWARGQLKQELVKLGWPAEDLAGYTPGTPHDIGLREDGW
ALRDYQRKAVSNFFDGGSGVVVLPCGAGKTLVGAGAMATSQTTTLILVTNTVSARQWRDE
LLKRTTLTADEIGEYSGQVKEVKPVTIATYQILTAKRKGEYAHLALLDALDWGLVVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AACYEVRIDLPASERLSYAAAADDERYRLAATAPAKLDVVRQLVDRHAGERILVIGQYLD
QIDELAETLGAPQLTGATPVDERERLYQEFRDGRTPVLVVSKVANFSVDLPEATVAIQVS
GSYGSRQEEAQRLGRLLRPKESGLSANFYTLVSRDTVDQDFAQNRQRFLAEQGYSYTILD
AHTLQAA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatggccccctgatcgtccagagcgaccgaaccgtcctgctcgaagtcgcccat
cccgccgccgaggacgcccgccacgacctcgccgtcttcgccgagctggagcgcgcaccc
gagcacatccacacgtaccggatcacccgtctcggcctgtggaacgcgcgggcggccggt
cacaccgccgacgacatgctggcgacgttggagcggtactccaagttccccatcccgcag
acggtgtcggtggacgtcgccgagacggtggcgcgttacggccgcctggtgatcgagcgc
gacgacgagggcgagctcgtgctgcgctcggcggatctcgcggtgctgacggaggtcgcg
agcgccaagcggatcgccccgctgctcctggagcgccgcgacgacaccacgttcgccgtg
caggcgtgggcgcgcgggcagctcaagcaggagctggtcaaactcggctggcccgccgag
gacctcgccggctacacccccggcactccgcacgacatcgggctgcgcgaggacggctgg
gccctgcgcgactaccagcgcaaggccgtcagcaacttcttcgacggaggctcgggagtc
gtcgtgctgccctgtggcgccggcaagacactcgtcggcgcgggcgcgatggcgacctcg
cagaccaccacgctcatcctcgtgaccaacaccgtctcggcgcggcagtggcgcgacgag
ctgctcaagcgcaccacactcaccgccgacgagatcggcgagtactcgggccaggtcaag
gaggtcaagccggtcaccatcgcgacgtaccagatcctcacagccaagcggaagggcgag
tacgcgcacctggcgctgctcgacgcgctcgactgggggctcgtggtctacgacgaggtg
cacctgctgccggcaccggtcttcaagctgaccgcggaactgcaggcccgccgccgcctc
ggtctcaccgcgaccctggtgcgcgaagacggtcgcgagggcgacgtcttcagcctcatc
ggccccaagcgcttcgacgcgccgtggaaggagatcgaggcgcagggcttcatctccccc
gccgcctgctacgaggtgcgcatcgacctccccgcctccgaacgcctcagctacgcggcg
gccgcggacgacgagcgctaccgcctcgcggcgaccgccccggccaagctggatgtcgtg
cgtcagctggtcgaccggcacgccggcgagcgcatcctcgtgatcggccagtacctcgac
cagatcgacgagctggcggagacgctcggcgcgcctcaactcacgggcgcgacgccggtg
gacgagcgcgaacggctgtaccaggagttccgcgacggccgcacgccggtgctcgtcgtg
agcaaggtcgcgaacttctcggtcgacctccccgaggcgacggtcgccatccaggtctcc
ggctcctacggctcccggcaggaggaggcgcagcgcctcggccgcttgctgcgccccaag
gagtccggcctgtcggcgaacttctacaccctcgtctcgcgggacaccgtcgaccaggac
ttcgcgcagaaccggcagcggttcctcgccgagcaggggtactcgtacacgatcctggac
gcgcacacgctgcaggcggcgtag
DBGET
integrated database retrieval system
