Leifsonia sp. ZF2019: IT072_18170
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Entry
IT072_18170 CDS
T10186
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
leiz Leifsonia sp. ZF2019
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
zf-HC2
Big_6
Sigma70_r2
Sigma70_r4_2
Phage_Coat_B
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
UAJ79108
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Position
complement(3730244..3732472)
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AA seq
742 aa
AA seq
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MTPRDTRPTPQHRKPSRRRGGRTDPEELSDSDLVERSRAGDELAYAELWRRHARAGLTVA
RSASSTLDPDDLVAEAFLKILQAVQSGKGPQVGFRPYLFTTIRNLAASWGRDRRESPLED
AEAVPDPETTESTTLKALDRSLTAQAFRSLPDRWQEVLWYCDVEQLSPASVAPLLGLSPN
GVSALAYRAREGLRQAWIQVHLQSLDADSECRWVTDRMGAYSRGKLAARETKRFEAHLLT
CARCTIVLGEARDVGSRLALIVLPLTVGTGAAAAYAAWIQGGHNAVLASAGSTAAAPLPA
SVSTAISSAGPAGGAAGGGAIAGGVTVAAWTGGGLLAAAAVAGVLVLGPQLLASGGDGPT
ADVPVATAPRALGEDGTRGSATSGPLADAPVAEPPASPRPGPSTPPVPPGTGRDTGQGDG
AAPSRPGVPADAAATEPATPSAPTTPTGPTTPTGPTTPTDPQPPAAPVVTSPWESDRATS
ATAVDLAGTGTPGAIVGVAARPSATSSAAATASTPASPLLASTTVSGTGEWSLAVDLSSL
ADGSWLLDVDQRTSAGTSAPTTLGLLVDRTALPPVIAAVDTGTGALAGRAAPIVSGTAEP
GATVVVSDGDRALTTVTADGSGSWSTGELMLASPSYALTARQTDEAGNVSPPSAAVTCIA
TAPDVFAMGSPFAALLVVHGEPGDTVEVWLDGAETGHTLALDSTGYGAVLLVVAPGDHRV
GATVVVDGRHGVLADTAVSAPS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcgcgacacgcgacccaccccgcagcaccggaagccctcccgccgccgtggg
ggccgaaccgaccccgaggagctctccgacagcgacctcgtcgagcggtcgcgcgccggt
gacgagctcgcgtacgcggagctgtggcgtcggcacgcccgcgcgggtctgaccgtggca
cgctccgcgagctcgacgctcgaccccgacgacctcgtcgccgaggcgttcttgaagatc
ctgcaggcggtgcagagcggcaaggggccccaggtggggttccgcccgtatctcttcacg
acgatccgcaacctggccgcgtcctggggccgcgatcgacgggagtcgccgctggaggac
gcagaggcggtccccgatcccgagacgacggagtcgaccacgctgaaggcgctcgaccgc
tccctcaccgcccaggcgttccgctccctccccgatcgctggcaggaggtgctctggtac
tgcgacgtcgagcagctgagcccggcctcggtcgccccgctgctgggcctcagcccgaac
ggcgtctcagcgctcgcctaccgggcgcgggagggactccgccaggcgtggatccaggtg
cacctccagtccctcgacgcggactcggagtgccgctgggtgacggatcgcatgggcgcc
tactcccgcggcaagctcgccgcgcgcgagacgaagcggttcgaggcgcatctgctcacc
tgcgcccgctgcacgatcgtgctcggcgaggcccgcgacgtcggatcgcggctggccctg
atcgtcctgcctctgacggtgggcacgggagccgcggccgcctacgccgcgtggatccag
ggtggacacaacgcggtcctggcctcggccgggtccacggcggcggctccgcttccggcg
tccgtctcgaccgcgatctcgtcggcgggtccggcgggtggtgcagccggtggcggagcg
atcgcgggcggggtcaccgtggccgcctggacgggcggcggactcctcgccgctgccgcg
gtcgccggggtcctcgtgctcggcccgcagctcctcgcctccggcggcgacggtccgacc
gccgacgtgccggtcgcgacggcgccgcgcgcgctgggagaggacgggacgaggggctcc
gcgacatccggccccctcgccgacgctccggtggccgagccgccggcctcgccgcggccc
ggaccgtccacgccgcctgtccctccgggcaccggccgcgacacggggcagggcgacggc
gccgcgccgtcgcgacccggggtgcccgccgatgcggccgcgacggagccggcgacgccc
agcgccccgaccaccccgacgggcccgaccaccccgacgggcccgaccaccccgaccgat
ccgcagcccccggccgcgcccgtggtcacctcgccctgggagtccgaccgcgccacctcc
gccaccgccgtggacctcgccggcaccggcactcccggcgccatcgtcggtgttgcggcc
cgaccgtcggcgacctcctcggccgccgcgaccgcgagcacaccggcctccccgctcctc
gcctcgaccaccgtctccggcacgggggaatggtcgctcgccgtcgatctgtcctccctc
gccgacggatcgtggcttctcgacgtcgaccagcgcacttccgccggcacctcggcgccg
acgacgctgggcctcctggtcgaccgcactgctctgcctcccgtgatcgccgcggtcgac
accggcaccggagccctggccgggcgcgcggccccgatcgtgtccgggacggcggagccg
ggggccactgtcgtggtgtcggacggtgaccgcgcgctgacgacggtcaccgccgacggg
tcgggatcctggagcaccggggagctcatgctcgcgtccccctcctacgcgctcaccgcc
cgtcagacggacgaggccggcaacgtctccccgccctccgcggcggtgacgtgcatcgcg
accgcaccggacgtgttcgcgatggggtctccgttcgccgccctcctcgtggtgcacggc
gagcccggtgacacggtcgaggtgtggctcgacggtgcggagacgggccacaccctggct
ctcgactccacgggctatggtgcggtgctcctcgtcgtcgcgcccggcgatcaccgcgtc
ggcgcgaccgtggtcgtggacgggcggcacggtgtgctcgccgacacggccgtgtcggcg
ccgtcctga
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