Leisingera sp. NJS204: ETW24_02420
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Entry
ETW24_02420 CDS
T05817
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
lej
Leisingera sp. NJS204
Brite
KEGG Orthology (KO) [BR:
lej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lej03009
]
ETW24_02420 (rlmF)
Enzymes [BR:
lej01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
ETW24_02420 (rlmF)
Ribosome biogenesis [BR:
lej03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ETW24_02420 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_31
Methyltransf_12
Methyltransf_25
Methyltransf_11
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QAX28338
LinkDB
All DBs
Position
complement(475615..476541)
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AA seq
308 aa
AA seq
DB search
MTTKTKLHPRNQHSRGYDFELLMAQTPELEAFMIQSPAGQATIDFQDVQAVRMLNRALLK
AHYDIDFWDIPAGYLCPPIPGRVDYIHYLADLLAGSNNQEIPRGRHIKALDIGTGASLVY
PLTGQSEYGWQFTGVDIDAGAIRSARQICKFNKLAITLRRQSKPENIFRGVIQPNDVFHV
TMCNPPFHGSIEKAKKGTQRKWANLGKGRSAKLNFGGQNAELWCPGGEIKFLARMVEQSM
EFADQCLWFTSLVSKKDNLQPLGRIIGKTRVADCEVVEMAQGQKTSRFIAWTYMKKNRRS
SFVKKART
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaagacaaagctgcacccccgcaatcaacactcacgaggctacgatttcgag
ctcttgatggcgcagacacctgagcttgaggccttcatgatccaaagcccagccggtcag
gcgacgattgattttcaagacgtgcaggccgtccgtatgcttaatcgggcgttgctaaag
gcgcattacgatattgatttttgggatattcccgccggttatttatgcccaccaatcccc
ggccgagtcgactacatccactatctcgcggacctgcttgctggcagcaacaaccaagaa
attccacgtggccgtcatatcaaagcgttggacatcggcacgggagcaagcttggtgtac
ccccttacgggccagagcgaatacggctggcaatttactggcgtcgatatcgacgcgggc
gcgatcagatcggcaagacagatatgtaaattcaacaagttggcaattacccttaggcga
caaagcaaacctgagaatatctttcgcggtgtgatccagcccaacgatgtttttcacgta
accatgtgcaatccgccattccatgggtctatcgagaaagcgaaaaagggtacccaacgc
aagtgggcgaaccttggcaaggggcgttcagcaaaactcaactttggtggccaaaacgcg
gaactttggtgccctggtggggagataaagtttctcgcccgcatggtcgaacagagcatg
gagttcgccgatcagtgtctgtggtttacttcgttggtgtcgaaaaaggataacctccag
cccctcggccgaattataggaaaaaccagggttgcagattgcgaagtcgtcgaaatggca
caggggcaaaaaaccagtcgctttattgcgtggacttacatgaagaaaaatcgccgctcc
tcctttgtcaagaaagctcggacatag
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