Leisingera sp. NJS204: ETW24_05340
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Entry
ETW24_05340 CDS
T05817
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lej
Leisingera sp. NJS204
Pathway
lej03030
DNA replication
lej03430
Mismatch repair
lej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ETW24_05340
03430 Mismatch repair
ETW24_05340
03440 Homologous recombination
ETW24_05340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lej03032
]
ETW24_05340
03400 DNA repair and recombination proteins [BR:
lej03400
]
ETW24_05340
Enzymes [BR:
lej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ETW24_05340
DNA replication proteins [BR:
lej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ETW24_05340
DNA repair and recombination proteins [BR:
lej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ETW24_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QAX28831
LinkDB
All DBs
Position
1066880..1070392
Genome browser
AA seq
1170 aa
AA seq
DB search
MTSSPRFIHLRSHTEYSLLEGALRLKKLPDLCKKHGMPAIAVTDTNAMFSALEFSVTLSG
AGIQPILGCQVDLTFQQAEPGGKPKLPAPLVLLAQSEEGYEGLMRLSSCLYVDNGGQLPQ
VTLEDLEANSAGLICLSGGPDGPVGLLLQQGQRPAAEVLMQQLKRIFPDRLYVELQRHPG
EHGQPEAEKQTERGHVEMAYAMELPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQSEP
RRRLTAQHYFKSQEEMVALFADLPEAVENTVEIAKRCAFKAYLRDPILPKFADDEVSELR
RIANEGLQKRLAVIPHAVSLEEYQARLDFELGIIEGMGFPGYFLIVADFIQWGKDQGIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QQKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALV
DEPRLKEEARNEPVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDLIKQSGRDLHTGEDGTQLYDPPEGAV
NEINAIPLDDKVTYELYSRAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKKIQSVHPLIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMGGVMNCDIHLTDKLAIYFEEVKKGLGLKYVPPCVNRSMATFNVVKGE
LVYALGALKNVGVDVMRLVTEARNESGYDRVFVNLFDFARRVNLKRVGKRPLEMLARAGA
FDQLDPNRRRVFESLGPLVDYSAAVHDQRNSSQVSLFGEAGEDLPEPRLPSVPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKDVMTLDEVTAKAERGPFMAKMAGVVAGRQERKS
ARGNRFAFAQLSDPSGAFEVTLFSEVLEKSREFLETGAKVVITAEATMESDQLKLLVRSV
GPVDSAIADAGRSSLRVYLSDAAAVGTVAQVLEDAKAAARNAARGEVYMYLQDPGLPGDV
EMDLGQAFPINPQIKGALKSLDGVLDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctctccccgattcattcacctgcgcagccataccgagtattccctgctggaa
ggcgcgctgcggctgaaaaagctgccggacctgtgcaaaaaacacgggatgccggcgatt
gctgtgaccgataccaatgccatgttctcggcgctggaattttctgtgacgctgtccggt
gcaggcatccagccgatcctgggctgccaggtcgatctgacctttcagcaggcggagccg
ggcggcaagcccaagctgcccgcgcccctggtgctgctggcgcagagcgaagaagggtat
gagggcctgatgcggctgtcgtcctgtctgtatgtggacaatggcggacagctgccgcag
gtcacattggaggatctggaggccaacagcgcggggctgatctgcctgagcggcgggccg
gacgggccggtggggctgttgctgcagcagggacagcggccggcggcagaggtgctgatg
cagcagctgaagcggatttttccggatcggctgtatgtggaactgcagcgccaccccggc
gagcacggccagccggaggcggaaaagcagaccgaacgcggccacgtggagatggcctat
gcgatggaactgccgctggtcgcgactaatgacgtctatttcccgaacaccgaaatgtac
gaggcccatgatgcgatgatctgcatcgctgagggtgcctatgtcgaccagtccgagccg
cgccgccggctgaccgcgcagcattacttcaaaagccaggaagaaatggtggcgctgttt
gccgacctgcccgaggcggttgaaaacacggtggagatcgccaaacgctgcgcgttcaag
gcctatttgcgggatccgatcctgcccaaattcgctgatgatgaggtttcagaactgcgc
cgcatcgccaatgagggcctgcagaaacgcctggcggtgatcccgcacgcggtgagtttg
gaggagtaccaggcacggctggattttgagctgggcatcattgagggcatgggattcccc
ggctatttcctgatcgttgcggattttattcaatggggcaaggatcagggcattccggtg
gggccggggcggggctcgggcgcgggatcgttggtggcttatgcgctgaccattaccgac
cttgacccgctgcgctattcgctgctgtttgagcggttcttgaacccggagcgggtatcg
atgcccgacttcgacatcgacttttgcatggaccgccgcgaagaggtgatccgctatgtg
cagcagaagtacggccgcgacaaagtcgggcagatcatcacattcggtgcgcttctgtcc
aaggcggcggtgcgcgacatcggacgggtcctgcagatgccctacggccaggtggaccgg
ctgtccaagatgatcccggtggaaggggtgaaaccggtttctatcgaaaaggcgctggtg
gatgaaccgcggctgaaggaagaggcgcgcaatgagccggtggtggaccggttgctgacc
tatggccagcaggtcgaggggctgctgcgcaatgcctcgacccacgcggcgggggtggtg
atcggcgaccggccgctggatgcgctggtgccgctctatcaggacccgcggtccgacatg
ccggccacccagttcaacatgaaatgggtggagcaggccgggctggtgaagttcgacttc
cttggcctgaaaaccctgaccgtcattcagaatgcggtggacctgatcaaacagtctggc
cgcgatctgcataccggcgaggacggcacgcaattgtacgatccgcccgaaggcgcggtg
aatgaaatcaacgccattccgctggacgacaaggttacatacgaactttattcgcgggcc
aagacggtggcggtgttccaggtggaatccaccggcatgatggatgcgctgaagcgcatg
aagccgacctgcatcgaggacatcgtggcgctggtggcgctgtaccggcccggcccgatg
gagaacatcccgacctattgcgaggtgaagaacgggctgaagaagatccaatcggtgcat
ccgctgatcgatcatatcctggaggaaacccaaggcatcatcgtctatcaggaacaggtg
atgcagattgcccaggtgatggccggctacagcctgggcggcgccgacctgctgcgccgg
gcgatgggtaagaaaatcaaggaggcgatggacgccgaacgcccgaagtttgaaaagggc
gcggcggagaatggcgtgcctgccaagaaggcctcggaagtcttcgacctgctggagaaa
ttcgccaactacggcttcaacaagtcgcacgcggcggcttatgcggtggtcagctatcag
accggctggctgaaggcgaaccacccggtggagttcatgggcggcgtcatgaactgcgat
atccatctgaccgacaagctggcgatctactttgaagaggtgaagaaagggctggggctg
aaatacgtgccgccctgcgtgaaccggtcgatggcgacgtttaatgtggtcaagggcgag
ttggtctatgcgctgggcgcgctgaagaacgttggtgttgacgtgatgcggctggtcacc
gaggcgcgcaatgagagcgggtatgatcgggtttttgtgaacctgttcgattttgcccgc
cgggtgaatttgaagcgcgtcggcaagcggcccttggagatgctggcgcgggcaggggcg
tttgaccagctcgaccccaaccgccgccgggtgttcgaaagcctcggcccgttggtggat
tactctgccgcggtgcatgaccagcgcaattccagccaggtgtcgctgttcggcgaggcg
ggcgaggatctgcccgaaccacgcctgccgagcgtaccggactggctgccggccgagcgg
ctgagcgaggaattcaaggcgatcgggttctacctgtcaggccatccgctggacgactac
atgcccgcgttgaagcgcaaggatgtgatgacgctggacgaagtgacggcgaaggccgag
cgcggcccgttcatggccaagatggcgggcgtggtggccgggcggcaggagaggaaatcc
gcccgcggcaaccgctttgcctttgcccagctatcggatccttccggtgcctttgaggtg
acactgttttccgaagtgctggagaaatcccgcgagttcctggagaccggcgccaaggtt
gtgatcaccgccgaggcgacgatggagagcgatcagctgaaactgctggtgcgctcggtt
ggtccggtggacagcgcgattgccgatgccgggcgcagttctttgcgggtttacctgagt
gatgccgcggcggttggcaccgtggcgcaagtgctggaggacgccaaggcggcggcccgc
aatgccgcgcgcggcgaggtctacatgtacctgcaggatccgggcctgcccggcgatgtg
gagatggatctgggccaggcgtttccgatcaacccgcagatcaaaggggcgctgaagtcg
ctggacggggtgctggatgtggaggagatttga
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