KEGG   Leisingera sp. NJS204: ETW24_18360
Entry
ETW24_18360       CDS       T05817                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lej  Leisingera sp. NJS204
Pathway
lej03030  DNA replication
lej03410  Base excision repair
lej03420  Nucleotide excision repair
lej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ETW24_18360 (polA)
   03410 Base excision repair
    ETW24_18360 (polA)
   03420 Nucleotide excision repair
    ETW24_18360 (polA)
   03440 Homologous recombination
    ETW24_18360 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lej03032]
    ETW24_18360 (polA)
   03400 DNA repair and recombination proteins [BR:lej03400]
    ETW24_18360 (polA)
Enzymes [BR:lej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ETW24_18360 (polA)
DNA replication proteins [BR:lej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ETW24_18360 (polA)
DNA repair and recombination proteins [BR:lej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ETW24_18360 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ETW24_18360 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Taq-exonuc
Other DBs
NCBI-ProteinID: QAX31179
LinkDB
Position
3778286..3781087
AA seq 933 aa
MSNTQFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLQRYVEGNTGP
DAPTHVAVIFDHSGKSFRNEMYDLYKANRPPAPEDLRPQFPLTREATRAFNIACKEVEGF
EADDIIATLAHQARDAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKRIDSDGVHEKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGDLTSLLDRAEEIKQPKRRQTLIE
HRAQIELSKRLVQLDCNMALDFSLEDLEVMEPDAETLLTFLSEMEFRTLTKRLADQLGMD
APAIPEAPAAAAEATAPEAVPFDKDKYECVSEAEALQVWVDRIRRRGWVAVDTETTGLDE
MVVDLVGISLCVEAGEACYIPLAHKAGGDDLFGGEGLSDGQMPLEEAVAMLKDVLEDPAI
LKIGQNMKYDAKILHRYGVDVAPIDDTMLMSYALHAGMHGHGMDALSERYLDHTPIPIKP
LLGSGKSAITFDRVPIDDAVPYAAEDADITLRLWQAFKPQLHQERVTTVYETLERPLVPV
LADMERNGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGRSFNVGSPKQLGEILFDEMSL
PGGKKGKTGAYATGADILEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINAETGRVH
TSYAQTGASTGRMASTDPNLQNIPVRTEEGRRIREAFVADEGNVLLSLDYSQIELRILAH
MAGIDALKAAFAEGQDIHAMTASEMFEVPLDQMTPEIRRQAKAINFGVIYGISGFGLARN
LRIPRKDAQGFIDRYFERFPGIRKYMDQTVEFAKEHGYVQTLFGRKIHTAEINAKGPKAG
FAKRAAINAPIQGTAADVIRRAMVRMPAAIAHLPARMLLQVHDELLFEVPEAAVEETIAA
ARQVMETAADPAVHLDVKLVVDAGRGQNWAEAH
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgagcaatactcagttcggcaaaggttgtcatctccatctgatcgacggctcggctttc
atcttccgcgcctatcacgcgctgccgccgctgacgcggaaatccgacgggctgccgatt
ggggcagtggccggtttttgcaacatgctgcagcgatatgtggagggcaacacaggcccc
gatgcgccgacccatgtggcggtgatattcgaccattccggcaagtcgttccgcaacgag
atgtacgacctttacaaagccaaccgtccgcccgcgcctgaggacttgcgcccgcagttc
ccgctgacccgcgaggcaacccgcgctttcaacatcgcctgcaaggaagttgaagggttc
gaggccgatgacatcatcgccaccttggcgcaccaggcgcgtgatgccggcgggcgctgt
accattatttcatccgacaaggacctgatgcagctggtcggcggcggcgttgaaatgctg
gacgcgatgaagaacaagcggatcgacagcgacggggtgcatgagaaattcggtgtcggc
cccgacagggtggtggatgtgcaggcgctggcgggtgacagcgttgataacgtgcccggc
gcgccggggatcgggatcaagaccgcagcgcttttgatcaatgaattcggcgatctgacc
agccttctggaccgcgccgaggagatcaaacagcccaagcgccgccagaccctgatcgaa
caccgcgcgcagattgaactgtccaaacggctggtgcagctggattgcaatatggcgctg
gatttctcgctggaggatctggaagtgatggagccggatgccgagaccctgctgaccttc
ctgtcggagatggaattccgcaccctgaccaagcgccttgccgatcagctgggcatggat
gcacctgccattcccgaagcgcccgccgctgcggctgaggccacagcacccgaagctgtg
cctttcgacaaggacaaatacgaatgcgtcagcgaggcggaagccttgcaggtctgggtg
gaccgcatccgccggcgcggctgggtggcggtggataccgagaccaccgggcttgatgaa
atggttgtcgatctggtcggcatttcgctgtgcgtggaagcgggcgaggcctgctatatt
ccgctggcgcataaggccgggggcgatgatctgtttggcggcgaggggttgtccgacggg
cagatgccgctggaagaggccgtcgcaatgctgaaggacgtgctggaagatccggcgatc
ctgaagatcggccagaacatgaaatacgacgccaagatcctgcaccgctacggggtggat
gtggcgccgattgatgacaccatgctgatgtcttacgcgctgcatgccgggatgcacggg
catggtatggatgcgctgtccgaacgctatctggaccacacgccgatcccgatcaagccg
ctcttggggtccggcaaatcggcgatcacctttgaccgggtgccgattgacgacgcggta
ccttatgcggctgaggacgccgatatcaccctgcgcctgtggcaggcgttcaagccgcag
ctgcatcaggagcgggtgaccacggtttacgagacgctggaacggcccttggtgccggtg
ctggcggatatggaacgcaacggcatcaaggtggaccgcgatacgctgagccggatgtcc
aatgcctttgcccagaagatggctggcttggaggccgagatccacgagctggcgggccgc
agcttcaacgtcggctcccccaaacagctgggggagatcctgtttgacgaaatgtccctg
cccggcggcaagaagggcaagacaggcgcctatgccaccggtgccgatatccttgaggat
ctggcgaccgaacatgatctgcccgcgcgagtgctggactggcggcagctcagcaaactg
aaatcgacctacacggatgcgctgcaggaccatatcaatgcggaaaccggccgggtgcat
acgtcttatgcacagaccggggcaagcaccggccgcatggcctcgaccgatccgaacctg
cagaacattccggtgcgcaccgaggaaggccgccgcatccgcgaggcctttgtggcggac
gagggcaatgttctgctatcgctggattacagccagattgagctgcgtattctggcgcat
atggccgggattgacgcgctgaaggcggcctttgccgaggggcaggatattcacgccatg
actgcgtcggagatgttcgaggtgccgctggaccagatgacaccggagatccgccgtcag
gccaaggcgatcaacttcggtgtgatctacggcatttccggctttggcctggcgcgcaat
ctgcgcattccgcgcaaggacgcgcaggggttcatcgaccgctatttcgagcgtttcccg
ggcatccgcaaatacatggatcagacggtggaattcgccaaggagcatggctatgtgcag
accttgttcgggcgcaagatccacaccgccgagatcaatgccaaggggccgaaagcaggc
tttgccaaacgcgccgcgatcaatgcgccgatccagggtaccgctgccgatgtgatccgc
cgggcgatggtccggatgcctgcggcgattgcccatctgcccgcacggatgctgctgcag
gtgcacgatgaactgctgttcgaagtgccggaagcggcagtggaggagaccatcgcagcc
gcccgtcaggtaatggagaccgccgccgatccggcagtgcatctggacgtgaaactggtg
gtggacgcaggccgcggtcagaactgggcggaggcgcactaa

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