Leisingera sp. NJS204: ETW24_18425
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Entry
ETW24_18425 CDS
T05817
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lej
Leisingera sp. NJS204
Pathway
lej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETW24_18425 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lej03019
]
ETW24_18425 (recQ)
03400 DNA repair and recombination proteins [BR:
lej03400
]
ETW24_18425 (recQ)
Enzymes [BR:
lej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETW24_18425 (recQ)
Messenger RNA biogenesis [BR:
lej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETW24_18425 (recQ)
DNA repair and recombination proteins [BR:
lej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETW24_18425 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
QAX31191
LinkDB
All DBs
Position
complement(3801818..3803917)
Genome browser
AA seq
699 aa
AA seq
DB search
MRPIAPMTAPASPAELAAPALTGASPILREIFGFDAFRPGQEEIVDAVTAGENVLAIMPT
GGGKSLCFQLPALLRDGVTVVISPLIALMRDQVRALQEAGVTAGALTSGNTEEETEAVWQ
AIEAGRLKLLYMAPERLASGAAMGMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELR
RALDVPLAAFTATADQETQEEIVQKLFDGEAPRSFLRGFDRPNIHLAFGAKDSPRRQILE
FAAARKGQSGIVYCGTRAKTEALSAALREGGHSACFYHGGMDAEDRRIVETRFAREDGLI
VVATVAFGMGIDKPDIRWVAHADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRR
TQVDEGLAPPERRAADHARLNALLGLAEALRCRRQKLLAYFGEESNPCGNCDLCDTPADV
FDGTTVVRKALSAVLRTEEWFGSGHLIDILLGADNERIRAKRHDQLSVYGCGKEFGKRQW
QAVFRQMMGHDLLRPDPERHGALRFTEAALPILRGEQSIELRRDTIKAAERRPAVKALVS
EEDAPLLSALKAKRRALAEAQKVPAYVIFPDRTLIEMAETRPETLDQMARVNGVGAKKLE
RYGDDFLSVITGAAEQLHPARRKLAGSGSGSVYDSLLEVQAQLARGDCGTMKPLTCSASL
LAKVAQMRAGDEAGITKLLGERRAERFAAAFLDVLRGAG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcccatcgcccccatgacagccccggcatccccggcagagttagccgcgccagcc
ctgacaggcgcgtccccgatcttgcgcgagatcttcggctttgacgccttccgtcccggc
caggaggaaatcgttgacgccgtgaccgcgggcgaaaacgtgctggcaatcatgcccacc
ggcggcggcaaatccctgtgtttccagctgcctgccctgttgcgcgacggtgtgacagtg
gtgatctcgccgctgattgcgctgatgcgcgatcaggtccgcgccctgcaggaggcgggc
gtcaccgccggcgcgctcacctccggcaataccgaagaagagaccgaagcggtctggcag
gcgatcgaggccgggcggctcaagcttctttatatggcgccggagcggcttgcctcgggg
gctgcgatgggcatgctgcgccgcatcggtgtcagcctgattgcggtggatgaggcgcac
tgcgtcagccagtggggccatgatttccgccccgactacctgcgcataggcgaattgcgc
cgcgccctggacgtgccgctggccgccttcaccgcaacggcggatcaggaaacccaggaa
gaaattgtccagaaactgtttgacggcgaggccccgcgcagcttcctgcgcggttttgac
cggccaaacatccatctggcctttggcgccaaggacagcccgcgccgccagatcctggaa
tttgccgccgcccgcaagggccagtccggcatcgtctattgcggcacccgggctaagacc
gaagccctgtctgcagccctgcgcgaaggtggccactccgcctgtttctatcacggcggc
atggacgccgaggaccgccgcattgttgagacccgctttgcccgcgaggacggcttgatc
gtggttgccacagttgcgtttggtatggggatcgacaaaccggacatccgctgggtcgcc
catgccgacctgccgaaaagcattgaggcttattatcaggaaatcggccgcgcgggccgg
gacggggcgcctgcggaaactctcaccctgttcggtcccgatgacatccgcctgcgccgc
acgcaggtggacgaaggattggccccgccggaacgccgcgccgccgaccatgcccggttg
aatgcgttgcttggtctggccgaggcgctgcgctgccgccgccagaagcttctggcctac
ttcggcgaggagtcaaacccctgcggcaattgcgacctctgcgacacgcccgcggatgtg
ttcgacggcaccactgtggtgcgcaaggcgctgtcagcggtgctcaggaccgaggaatgg
ttcggctcgggtcatctgatcgacatccttttgggcgctgacaacgagcggatccgggcc
aagcgccatgaccagctgtcggtctatggctgcggcaaggaattcggcaagcgccaatgg
caggcggtgttccggcagatgatgggccacgacctcttgcgccccgatccggaacgccac
ggcgcgctccgcttcacggaagccgccctgccgatcctgcgcggtgaacagtcgatcgag
ctgcgccgcgacaccatcaaagcggctgagcgccgtcccgcagtgaaggcactggtctct
gaagaagacgcgccgctgctgtcggctctcaaggccaagcggcgtgcattggcggaggcg
cagaaagtgccggcctatgtgatctttcccgaccgcaccctcattgagatggccgagacc
cgcccggaaacgctggaccagatggcgcgtgtgaacggtgtcggcgccaagaagctggag
cgctacggcgatgatttcctaagcgtgatcaccggcgccgccgagcagctgcatcccgca
aggcgcaagctggccgggagcgggtccggttcggtttacgattcgctgctggaagtgcag
gcacagcttgcccgcggggactgcggcaccatgaaaccgctcacctgttctgcgtcgctg
cttgcgaaagtggcgcagatgcgcgccggtgacgaggcggggatcacgaaactgttaggg
gagcgccgcgccgaacgtttcgcggcggcgtttctggacgtcctgcgcggcgcgggctag
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